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Potato
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Potato
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 6
  • vacuole 5
  • plasma membrane 7
  • golgi 5
  • nucleus 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:nucleus, secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:endoplasmic reticulum
Plant-mPloc:nucleus
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI

Inferred distinct locusB in Crop

locusBlocations
PGSC0003DMT400020285
PGSC0003DMT400021612
PGSC0003DMT400041983
PGSC0003DMT400044244
PGSC0003DMT400071109

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G04310.1 PGSC0003DMT400041983 AT1G04310.1 18577522
AT1G04310.1 PGSC0003DMT400044244 AT1G04310.1 18577522
AT1G04310.1 PGSC0003DMT400020285 AT1G66340.1 18577522
AT1G04310.1 PGSC0003DMT400071109 AT1G66340.1 18577522
AT3G23150.1 PGSC0003DMT400020285 AT1G66340.1 18577522
AT3G23150.1 PGSC0003DMT400071109 AT1G66340.1 18577522
AT3G23150.1 PGSC0003DMT400021612 AT5G03730.1 12177468
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Solyc09g089610.2.1 Tomato endoplasmic reticulum 93.89 93.77
PGSC0003DMT400041983 Potato plasma membrane 62.82 62.16
VIT_05s0049g00090.t01 Wine grape plasma membrane 58.7 57.85
KRG90373 Soybean plasma membrane 33.86 55.8
KRH34517 Soybean plasma membrane 51.13 52.24
KRG92290 Soybean plasma membrane 52.19 51.57
PGSC0003DMT400073847 Potato plasma membrane 50.73 49.8
GSMUA_Achr8P14350_001 Banana endoplasmic reticulum 48.61 48.35
GSMUA_Achr11P... Banana plasma membrane 48.61 48.28
PGSC0003DMT400060160 Potato endoplasmic reticulum 48.61 47.97
CDY35503 Canola plasma membrane 49.0 47.37
Bra023756.1-P Field mustard plasma membrane 48.87 47.18
CDY70443 Canola plasma membrane 48.87 47.18
AT3G23150.1 Thale cress endoplasmic reticulum, plasma membrane 48.34 47.09
KRG90374 Soybean cytosol 13.55 45.54
TraesCS2D01G000500.1 Wheat plasma membrane 46.48 45.1
TraesCS2A01G000200.1 Wheat plasma membrane 46.35 44.86
HORVU0Hr1G001750.2 Barley endoplasmic reticulum 46.22 44.79
TraesCS2B01G023800.1 Wheat plasma membrane 45.68 44.73
HORVU2Hr1G000030.1 Barley plasma membrane 45.82 44.52
EES10426 Sorghum plasma membrane 45.42 44.24
Os04t0169100-02 Rice plasma membrane 44.62 44.04
Zm00001d004372_P003 Maize plasma membrane 44.49 43.51
TraesCS6B01G439600.1 Wheat mitochondrion 45.15 43.37
TraesCS6D01G383600.1 Wheat mitochondrion 44.75 42.98
GSMUA_AchrUn_... Banana endoplasmic reticulum, extracellular, plasma membrane 36.92 42.64
Zm00001d025050_P001 Maize cytosol, golgi, plasma membrane 44.89 42.04
HORVU6Hr1G080170.1 Barley plasma membrane 10.49 42.02
Zm00001d051889_P002 Maize endoplasmic reticulum 41.97 41.91
OQU85974 Sorghum plasma membrane 43.16 41.88
Bra015303.1-P Field mustard endoplasmic reticulum 34.0 41.56
TraesCS6A01G399400.2 Wheat mitochondrion, plasma membrane 44.62 41.53
CDY67999 Canola plasma membrane 34.13 41.52
CDY70681 Canola endoplasmic reticulum 34.0 41.49
HORVU6Hr1G091700.6 Barley cytosol, mitochondrion, plasma membrane 44.62 40.88
CDX86641 Canola endoplasmic reticulum 32.01 40.5
AT1G04310.1 Thale cress endoplasmic reticulum 34.26 40.0
Os02t0820900-03 Rice mitochondrion 44.36 39.95
HORVU6Hr1G071860.2 Barley plasma membrane 35.86 37.4
TraesCS6D01G266200.1 Wheat plasma membrane 35.99 37.33
TraesCS6A01G285800.1 Wheat plasma membrane 35.86 37.09
TraesCS6B01G360200.1 Wheat cytosol, endoplasmic reticulum, golgi 35.86 37.09
TraesCS6A01G329400.1 Wheat plasma membrane 35.72 36.85
TraesCS6B01G314600.1 Wheat plasma membrane 35.59 36.76
TraesCS6D01G308300.1 Wheat plasma membrane 35.19 36.4
HORVU6Hr1G080180.1 Barley cytosol 24.04 35.98
PGSC0003DMT400020285 Potato endoplasmic reticulum, plasma membrane, plastid 35.06 35.01
PGSC0003DMT400071109 Potato cytosol, endoplasmic reticulum, plasma membrane 34.13 34.92
PGSC0003DMT400081399 Potato cytosol, plasma membrane, vacuole 29.08 34.49
Os07t0259100-01 Rice mitochondrion, plasma membrane 35.33 34.23
Zm00001d053594_P001 Maize plasma membrane 35.33 33.13
EES06508 Sorghum mitochondrion, plasma membrane 35.59 32.41
KXG36402 Sorghum plasma membrane 34.93 30.76
Zm00001d021687_P001 Maize plasma membrane 33.47 29.47
Bra030564.1-P Field mustard plasma membrane 37.72 16.87
CDY15498 Canola plasma membrane 37.85 16.67
PGSC0003DMT400084727 Potato cytosol, golgi, plasma membrane 10.09 14.13
PGSC0003DMT400075775 Potato endoplasmic reticulum, golgi, plasma membrane 18.33 13.91
PGSC0003DMT400015729 Potato cytosol 6.11 12.5
PGSC0003DMT400075949 Potato cytosol 15.01 11.14
PGSC0003DMT400011818 Potato extracellular, golgi, peroxisome 10.09 9.92
PGSC0003DMT400009219 Potato plastid 15.67 9.74
Protein Annotations
Gene3D:1.10.287.130EntrezGene:102599512MapMan:11.5.2.1Gene3D:3.30.450.40Gene3D:3.30.565.10Gene3D:3.40.50.2300
InterPro:CheY-like_superfamilyncoils:CoilInterPro:ETRInterPro:GAFInterPro:GAF-like_dom_sfGO:GO:0000155
GO:GO:0000160GO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0004673GO:GO:0004871
GO:GO:0005488GO:GO:0005515GO:GO:0005524GO:GO:0005575GO:GO:0005622GO:GO:0005623
GO:GO:0005737GO:GO:0005783GO:GO:0005789GO:GO:0006464GO:GO:0007154GO:GO:0007165
GO:GO:0008150GO:GO:0008152GO:GO:0009719GO:GO:0009873GO:GO:0009987GO:GO:0010105
GO:GO:0016020GO:GO:0016021GO:GO:0016301GO:GO:0016310GO:GO:0016740GO:GO:0018106
GO:GO:0019538GO:GO:0023014GO:GO:0038023GO:GO:0038199GO:GO:0046872GO:GO:0050896
GO:GO:0051740InterPro:HATPase_C_sfInterPro:HisK_dim/PInterPro:HisK_dim/P_sfInterPro:His_kinase_domInterPro:IPR001789
InterPro:IPR005467InterPro:IPR029016InterPro:IPR036890UniProt:M1BFV8PFAM:PF00072PFAM:PF00512
PFAM:PF01590EnsemblPlantsGene:PGSC0003DMG400017186PGSC:PGSC0003DMG400017186EnsemblPlants:PGSC0003DMT400044244PIRSF:PIRSF026389PFscan:PS50109
PFscan:PS50110PANTHER:PTHR43719PANTHER:PTHR43719:SF6SMART:SM00065SMART:SM00388SMART:SM00448
SUPFAM:SSF47384SUPFAM:SSF52172SUPFAM:SSF55781SUPFAM:SSF55874InterPro:Sig_transdc_resp-reg_receiverSignalP:SignalP-TM
TMHMM:TMhelixUniParc:UPI00029578D0RefSeq:XP_006354517.1RefSeq:XP_006354518.1RefSeq:XP_006354519.1RefSeq:XP_015167384.1
SEG:seg:::::
Description
Ethylene receptor [Source:PGSC_GENE;Acc:PGSC0003DMG400017186]
Coordinates
chr9:-:55982330..55985283
Molecular Weight (calculated)
84958.3 Da
IEP (calculated)
6.870
GRAVY (calculated)
0.123
Length
753 amino acids
Sequence
(BLAST)
001: MLKKVVSWLL FLSIVELWVV DGYIECPCDD SDAFWSMETM LFVQKAGDLG IAVAYFSIPI EIIYFVTCSS FPFKWVLFQF GAFIVLCGLT HFLTFLTHFG
101: KYTFHLILAL IVCKLLTALV SMLTAITLMN LIPLLLKAKA REFMLRRKNR DLDREVGRIK QKEELGLHVR MLTKEIRKSI DRHTILYTTL VELSKLLSLQ
201: NCVIWMPNEN RTEMKLTHDT TRENVSSMYN VPIPISDQEV KEIKGSDDVK ILGAGSRLAA ASSRGSCEPE TVAAIRIPML MVSNFGGETH EIVSQCYAIL
301: VLVQPSGHGR FWLNQEIEIV TAAADQVAVA LSHAAVVEES EYIKDRLTEQ NQALQKAREE ALRASQARSA FQTVMSHRLR RPMHSILGLL SMLQEEKLRD
401: EQQLLVHSII KSSNVVSTLM DDVIVTSTKE NVKFPLEMKH FQLHSLIREA ACIAKSLCMY KGYNITIEVE KSFPNQVMGD ERRFFQVLLH IIGNLLNGTN
501: GGHLTFRALS ASENDVSWKT PRSNSSNDIV YIKFEICTKI NRSESEITPA TPTYYIEEIE ESLSFAVCRK LVHLMQGDIF IIQNLEDFDQ GMAVIVGFQR
601: QPLIPIGMSE YVESSDPTYP HPVLQGVKVL LADYDDSNRA VTRKMLEKLG CIVTVVSSGY ECLGAVGPIV SLLQIILLDL HLPDLDGFEV TMRLRKHRSQ
701: TWPLIIGLAA ITDEDIRKCL KIGMNGIICK PLLLSGLADE LQKVLLHANR GMR
Best Arabidopsis Sequence Match ( AT3G23150.1 )
(BLAST)
001: MVKEIASWLL ILSMVVFVSP VLAINGGGYP RCNCEDEGNS FWSTENILET QRVSDFLIAV AYFSIPIELL YFVSCSNVPF KWVLFEFIAF IVLCGMTHLL
101: HGWTYSAHPF RLMMAFTVFK MLTALVSCAT AITLITLIPL LLKVKVREFM LKKKAHELGR EVGLILIKKE TGFHVRMLTQ EIRKSLDRHT ILYTTLVELS
201: KTLGLQNCAV WMPNDGGTEM DLTHELRGRG GYGGCSVSME DLDVVRIRES DEVNVLSVDS SIARASGGGG DVSEIGAVAA IRMPMLRVSD FNGELSYAIL
301: VCVLPGGTPR DWTYQEIEIV KVVADQVTVA LDHAAVLEES QLMREKLAEQ NRALQMAKRD ALRASQARNA FQKTMSEGMR RPMHSILGLL SMIQDEKLSD
401: EQKMIVDTMV KTGNVMSNLV GDSMDVPDGR FGTEMKPFSL HRTIHEAACM ARCLCLCNGI RFLVDAEKSL PDNVVGDERR VFQVILHIVG SLVKPRKRQE
501: GSSLMFKVLK ERGSLDRSDH RWAAWRSPAS SADGDVYIRF EMNVENDDSS SQSFASVSSR DQEVGDVRFS GGYGLGQDLS FGVCKKVVQL IHGNISVVPG
601: SDGSPETMSL LLRFRRRPSI SVHGSSESPA PDHHAHPHSN SLLRGLQVLL VDTNDSNRAV TRKLLEKLGC DVTAVSSGFD CLTAIAPGSS SPSTSFQVVV
701: LDLQMAEMDG YEVAMRIRSR SWPLIVATTV SLDEEMWDKC AQIGINGVVR KPVVLRAMES ELRRVLLQAD QLL
Arabidopsis Description
ETR2Ethylene receptor 2 [Source:UniProtKB/Swiss-Prot;Acc:Q0WPQ2]
SUBAcon: [endoplasmic reticulum,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.