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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • endoplasmic reticulum 6
  • golgi 5
  • extracellular 5
  • vacuole 4
  • plasma membrane 6
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra040134.1-P Field mustard plasma membrane 94.52 94.52
CDY21123 Canola cytosol 36.95 94.33
CDY30004 Canola plasma membrane 94.26 94.26
CDY64702 Canola mitochondrion 15.14 88.55
VIT_14s0081g00630.t01 Wine grape plasma membrane 64.23 64.74
Solyc06g051610.1.1 Tomato cytosol 13.71 63.25
PGSC0003DMT400073847 Potato plasma membrane 61.1 61.02
KRG92613 Soybean plasma membrane 60.84 60.84
KRH68803 Soybean plasma membrane 60.84 60.68
KRG98373 Soybean extracellular 13.84 60.57
KRH34165 Soybean plasma membrane 60.57 60.5
KRG97057 Soybean plasma membrane 57.44 60.19
Solyc11g006180.1.1 Tomato plasma membrane 60.18 60.1
PGSC0003DMT400060160 Potato endoplasmic reticulum 59.27 59.5
Solyc05g055070.2.1 Tomato plasma membrane 57.57 59.19
Solyc04g049320.1.1 Tomato cytosol, plastid, vacuole 8.22 57.27
Solyc12g044870.1.1 Tomato cytosol 12.4 57.23
Solyc11g065590.1.1 Tomato cytosol 6.66 56.67
Solyc09g082910.1.1 Tomato cytosol 12.14 56.02
Solyc06g036450.1.1 Tomato cytosol 7.31 56.0
Solyc04g049990.1.1 Tomato cytosol 9.27 54.2
Solyc09g011680.1.1 Tomato cytosol 7.31 53.85
Solyc01g014770.1.1 Tomato cytosol 9.4 53.73
Solyc12g062760.1.1 Tomato cytosol 6.14 53.41
Solyc12g038690.1.1 Tomato cytosol 4.44 53.12
Solyc04g025660.1.1 Tomato cytosol 7.18 52.88
GSMUA_Achr11P... Banana plasma membrane 51.7 52.24
AT3G23150.1 Thale cress endoplasmic reticulum, plasma membrane 51.96 51.49
GSMUA_Achr8P14350_001 Banana endoplasmic reticulum 50.39 50.99
Solyc09g065310.1.1 Tomato cytosol 4.18 50.0
Os04t0169100-02 Rice plasma membrane 48.96 49.15
GSMUA_AchrUn_... Banana endoplasmic reticulum, extracellular, plasma membrane 41.51 48.77
EES10426 Sorghum plasma membrane 49.09 48.64
TraesCS2B01G023800.1 Wheat plasma membrane 48.69 48.5
TraesCS2D01G000500.1 Wheat plasma membrane 49.09 48.45
TraesCS2A01G000200.1 Wheat plasma membrane 48.96 48.2
HORVU0Hr1G001750.2 Barley endoplasmic reticulum 48.3 47.62
Zm00001d004372_P003 Maize plasma membrane 47.52 47.27
HORVU2Hr1G000030.1 Barley plasma membrane 47.52 46.97
Zm00001d051889_P002 Maize endoplasmic reticulum 45.69 46.42
Solyc04g064840.1.1 Tomato endoplasmic reticulum 10.97 46.41
TraesCS6B01G439600.1 Wheat mitochondrion 47.39 46.3
Zm00001d025050_P001 Maize cytosol, golgi, plasma membrane 48.56 46.27
OQU85974 Sorghum plasma membrane 46.87 46.26
TraesCS6D01G383600.1 Wheat mitochondrion 47.26 46.17
Solyc08g068360.1.1 Tomato cytosol 7.18 45.83
AT1G04310.1 Thale cress endoplasmic reticulum 37.73 44.81
TraesCS6A01G399400.2 Wheat mitochondrion, plasma membrane 47.26 44.75
Solyc12g027610.1.1 Tomato cytosol 11.36 44.62
HORVU6Hr1G080170.1 Barley plasma membrane 10.84 44.15
HORVU6Hr1G091700.6 Barley cytosol, mitochondrion, plasma membrane 47.0 43.8
Os02t0820900-03 Rice mitochondrion 45.82 41.99
TraesCS6B01G360200.1 Wheat cytosol, endoplasmic reticulum, golgi 38.25 40.25
TraesCS6A01G285800.1 Wheat plasma membrane 38.12 40.11
TraesCS6D01G266200.1 Wheat plasma membrane 37.99 40.08
TraesCS6A01G329400.1 Wheat plasma membrane 37.73 39.59
TraesCS6D01G308300.1 Wheat plasma membrane 37.6 39.56
TraesCS6B01G314600.1 Wheat plasma membrane 37.47 39.37
HORVU6Hr1G071860.2 Barley plasma membrane 36.68 38.92
HORVU6Hr1G080180.1 Barley cytosol 25.2 38.37
Os07t0259100-01 Rice mitochondrion, plasma membrane 38.51 37.97
AT1G66340.1 Thale cress plasma membrane 35.9 37.26
AT2G40940.1 Thale cress cytosol, nucleus, plasma membrane 27.81 34.75
Zm00001d053594_P001 Maize plasma membrane 36.16 34.5
EES06508 Sorghum mitochondrion, plasma membrane 36.16 33.49
KXG36402 Sorghum plasma membrane 35.51 31.81
Zm00001d021687_P001 Maize plasma membrane 34.46 30.88
AT2G01830.2 Thale cress cytosol 19.58 13.89
AT1G27320.1 Thale cress endoplasmic reticulum, golgi, plasma membrane 18.67 13.8
AT5G10720.1 Thale cress nucleus 15.8 13.12
AT5G35750.1 Thale cress endoplasmic reticulum, golgi, plasma membrane 19.32 12.59
AT2G17820.1 Thale cress cytosol, nucleus, plasma membrane 16.84 10.69
AT2G47430.1 Thale cress plasma membrane 13.71 9.36
Protein Annotations
Gene3D:1.10.287.130MapMan:11.5.2.1Gene3D:3.30.450.40Gene3D:3.30.565.10Gene3D:3.40.50.2300EntrezGene:819614
UniProt:A0A178VKQ4ProteinID:AAD02485.1ProteinID:AAF04908.1ProteinID:AEE74099.1ProteinID:AEE74100.1ArrayExpress:AT3G04580
EnsemblPlantsGene:AT3G04580RefSeq:AT3G04580TAIR:AT3G04580RefSeq:AT3G04580-TAIR-GEnsemblPlants:AT3G04580.1TAIR:AT3G04580.1
Unigene:At.21286InterPro:CheY-like_superfamilySymbol:EIN4InterPro:ETRInterPro:GAFInterPro:GAF-like_dom_sf
GO:GO:0000155GO:GO:0000160GO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0004673
GO:GO:0004674GO:GO:0004871GO:GO:0004872GO:GO:0005488GO:GO:0005515GO:GO:0005524
GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0005783GO:GO:0005789
GO:GO:0006464GO:GO:0006468GO:GO:0007154GO:GO:0007165GO:GO:0008150GO:GO:0008152
GO:GO:0009719GO:GO:0009873GO:GO:0009987GO:GO:0010105GO:GO:0016020GO:GO:0016021
GO:GO:0016301GO:GO:0016310GO:GO:0016740GO:GO:0018106GO:GO:0019538GO:GO:0023014
GO:GO:0038023GO:GO:0038199GO:GO:0046872GO:GO:0050896GO:GO:0051740InterPro:HATPase_C
InterPro:HATPase_C_sfInterPro:HisK_dim/PInterPro:HisK_dim/P_sfInterPro:IPR001789InterPro:IPR029016InterPro:IPR036890
RefSeq:NP_187108.1RefSeq:NP_974218.1ProteinID:OAP06947.1PFAM:PF00072PFAM:PF01590PFAM:PF02518
PIRSF:PIRSF026389PO:PO:0000003PO:PO:0000013PO:PO:0000037PO:PO:0000230PO:PO:0000293
PO:PO:0001054PO:PO:0001078PO:PO:0001081PO:PO:0001185PO:PO:0004507PO:PO:0007064
PO:PO:0007095PO:PO:0007098PO:PO:0007103PO:PO:0007115PO:PO:0007123PO:PO:0007131
PO:PO:0007611PO:PO:0007616PO:PO:0008019PO:PO:0009001PO:PO:0009005PO:PO:0009006
PO:PO:0009009PO:PO:0009010PO:PO:0009025PO:PO:0009029PO:PO:0009030PO:PO:0009031
PO:PO:0009032PO:PO:0009046PO:PO:0009047PO:PO:0009052PO:PO:0020030PO:PO:0020038
PO:PO:0020100PO:PO:0020137PO:PO:0025022PO:PO:0025034PO:PO:0025281PFscan:PS50110
PANTHER:PTHR43719PANTHER:PTHR43719:SF6UniProt:Q9ZTP3SMART:SM00065SMART:SM00388SMART:SM00448
SUPFAM:SSF47384SUPFAM:SSF52172SUPFAM:SSF55781SUPFAM:SSF55874InterPro:Sig_transdc_resp-reg_receiverSignalP:SignalP-TM
TMHMM:TMhelixUniParc:UPI00000486A6SEG:seg:::
Description
EIN4EIN4 [Source:UniProtKB/TrEMBL;Acc:A0A178VKQ4]
Coordinates
chr3:-:1235209..1238616
Molecular Weight (calculated)
86255.4 Da
IEP (calculated)
8.286
GRAVY (calculated)
0.042
Length
766 amino acids
Sequence
(BLAST)
001: MLRSLGLGLL LFALLALVSG DNDYVSCNCD DEGFLSVHTI LECQRVSDLL IAIAYFSIPL ELLYFISFSN VPFKWVLVQF IAFIVLCGMT HLLNAWTYYG
101: PHSFQLMLWL TIFKFLTALV SCATAITLLT LIPLLLKWKV RELYLKQNVL ELNEEVGLMK RQKEMSVQVR MLTREIRKSL DKHMILRTTL VELSKILDLQ
201: NSAVWMPNEN RTEMHLTHEL RANPMRSFRV IPINDPDVVQ VRETKVVTIL RKNSVLAVES SGCGGSEEFG PVAAIRMPML HGLNFKGGTP EFVDTPYAIM
301: VLVLPSANSR VWTDKEIEIA EVVADQVAVA ISHASVLEES QLMREKLGIQ NRALLRAKQN AMMASQARNT CQKVMSHGMR RPMHTILGLL SMFQSESMSL
401: DQKIIVDALM KTSTVLSALI NDVIDISPKD NGKSALEVKR FQLHSLIREA ACVAKCLSVY KGYGFEMDVQ TRLPNLVVGD EKRTFQLVMY MLGYILDMTD
501: GGKTVTFRVI CEGTGTSQDK SKRETGMWKS HMSDDSLGVK FEVEINEIQN PPLDGSAMAM RHIPNRRYHS NGIKEGLSLG MCRKLAQMMQ GNIWISPKSH
601: GQTQSMQLVL RFQTRPSIRR SILAGNAPEL QHPNSNSILR GLRITLADDD DVNRTVTKRL LEKLGCEVTA VSSGFECLNA LSNVEMSYRV VILDLQMPEM
701: DGFEVAMKIR KFCGHHWPLI IALTASTEDH VRERCLQMGM NGMIQKPVLL HVMASELRRA LQTASE
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.