Factsheet for GSMUA_Achr1P23390_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os06t0654300-00	Rice	cytosol, mitochondrion, plastid	12.7	87.4
CDX78398	Canola	cytosol	43.94	61.15
VIT_04s0069g00750.t01	Wine grape	nucleus	59.15	61.11
KRH61623	Soybean	cytosol	64.19	56.67
Bra010698.1-P	Field mustard	cytosol	21.4	56.67
CDX97049	Canola	nucleus	57.55	56.14
CDX69808	Canola	nucleus	57.55	56.01
Bra009011.1-P	Field mustard	nucleus	57.44	55.9
KRH52290	Soybean	nucleus	63.73	55.87
CDX90318	Canola	cytosol	19.68	55.84
PGSC0003DMT400075949	Potato	cytosol	64.76	55.82
Solyc08g068960.2.1	Tomato	cytosol	64.99	55.8
Bra006074.1-P	Field mustard	cytosol	24.49	55.58
CDX78397	Canola	cytosol	24.37	55.32
KRH05331	Soybean	cytosol	63.96	55.29
KRH15703	Soybean	cytosol	63.84	55.14
CDY67688	Canola	nucleus	57.21	54.88
Bra028573.1-P	Field mustard	nucleus	57.09	54.77
CDY40112	Canola	nucleus	57.32	54.69
AT5G10720.1	Thale cress	nucleus	57.21	54.23
TraesCS2A01G472800.2	Wheat	nucleus	36.84	53.58
Bra006075.1-P	Field mustard	nucleus	56.75	53.1
KRG88576	Soybean	cytosol	51.14	52.96
TraesCS2B01G495500.1	Wheat	nucleus	36.38	52.39
TraesCS7B01G405100.1	Wheat	nucleus	57.32	51.7
OQU76804	Sorghum	nucleus	56.64	51.62
Zm00001d036704_P002	Maize	nucleus	56.75	51.4
TraesCS7D01G485500.1	Wheat	nucleus	56.98	51.39
TraesCS7A01G498200.2	Wheat	nucleus	56.75	51.24
HORVU2Hr1G106760.1	Barley	cytosol	36.5	51.04
Zm00001d046928_P002	Maize	nucleus	56.52	50.61
TraesCS2D01G472500.1	Wheat	cytosol	32.15	48.87
CDX70367	Canola	endoplasmic reticulum, golgi	56.18	35.79
GSMUA_Achr5P00120_001	Banana	cytosol	10.53	25.7
GSMUA_Achr10P...	Banana	cytosol	22.2	21.97
GSMUA_Achr4P17470_001	Banana	cytosol	19.45	21.94
GSMUA_Achr8P22930_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	20.94	21.58
GSMUA_Achr7P11260_001	Banana	mitochondrion	21.62	20.75
GSMUA_AchrUn_...	Banana	cytosol	22.31	20.48
GSMUA_AchrUn_...	Banana	endoplasmic reticulum, peroxisome, plasma membrane	21.97	19.69
GSMUA_Achr11P...	Banana	cytosol	13.96	19.21
GSMUA_Achr4P15980_001	Banana	cytosol	21.85	19.14
GSMUA_AchrUn_...	Banana	cytosol, golgi, plasma membrane	21.62	18.94
GSMUA_Achr1P22740_001	Banana	cytosol	17.62	18.92
GSMUA_Achr5P21290_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	12.36	18.72
GSMUA_Achr11P...	Banana	plasma membrane	15.1	17.41
GSMUA_Achr8P14350_001	Banana	endoplasmic reticulum	14.19	16.38
GSMUA_AchrUn_...	Banana	endoplasmic reticulum, extracellular, plasma membrane	11.44	15.34
GSMUA_Achr3P22920_001	Banana	extracellular	16.82	15.31
GSMUA_Achr7P26840_001	Banana	plasma membrane	10.98	14.48
GSMUA_Achr11P...	Banana	cytosol	4.92	11.68

Protein Annotations

Gene3D:1.10.287.130	Gene3D:3.30.450.20	Gene3D:3.40.50.2300	MapMan:35.1	InterPro:CheY-like_superfamily	ncoils:Coil
GO:GO:0000155	GO:GO:0000160	GO:GO:0003674	GO:GO:0003824	GO:GO:0004673	GO:GO:0004871
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005773	GO:GO:0005886
GO:GO:0006464	GO:GO:0006950	GO:GO:0007154	GO:GO:0007165	GO:GO:0007275	GO:GO:0008150
GO:GO:0008152	GO:GO:0009605	GO:GO:0009607	GO:GO:0009719	GO:GO:0009788	GO:GO:0009987
GO:GO:0010105	GO:GO:0016020	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	GO:GO:0016772
GO:GO:0018106	GO:GO:0019538	GO:GO:0023014	GO:GO:0038023	GO:GO:0048364	GO:GO:0070301
GO:GO:0071219	GO:GO:0071732	GO:GO:0090333	EnsemblPlantsGene:GSMUA_Achr1G23390_001	EnsemblPlants:GSMUA_Achr1P23390_001	EnsemblPlants:GSMUA_Achr1T23390_001
InterPro:HATPase_C	InterPro:HATPase_C_sf	InterPro:HisK_dim/P	InterPro:HisK_dim/P_sf	InterPro:His_kinase_dom	InterPro:IPR001789
InterPro:IPR005467	InterPro:IPR036890	UniProt:M0S2E6	InterPro:PAS-like_dom_sf	PFAM:PF00072	PFAM:PF00512
PFAM:PF02518	PRINTS:PR00344	PFscan:PS50109	PFscan:PS50110	PANTHER:PTHR43047	PANTHER:PTHR43047:SF5
SMART:SM00387	SMART:SM00388	SMART:SM00448	SUPFAM:SSF47384	SUPFAM:SSF52172	SUPFAM:SSF55785
SUPFAM:SSF55874	InterPro:Sig_transdc_His_kin-like_C	InterPro:Sig_transdc_resp-reg_receiver	UniParc:UPI00029517F3	SEG:seg	:

Description

Histidine kinase 5 [Source:GMGC_GENE;Acc:GSMUA_Achr1G23390_001]

Coordinates

chr1:+:17732144..17749124

Molecular Weight (calculated)

99310.5 Da

IEP (calculated)

6.517

GRAVY (calculated)

-0.422

Length

874 amino acids

Sequence
(BLAST)

001: MGGEMIEDAD AEVLSSMWPV DIGNEARKQF NIENPGMGRD MLKDVTIKED PSVVDFKRLL ELTNYSEKGS SQLAYLVKHW QYKHVNTARL INEELDILNK
101: QRQEVELKKQ EILEEHQFEE ERYTGSRRQL SVLDEVCDIW GRVPKRRNDV LAYNKKLDID AEYGTVIYWK ERAIQLDKML EASIHREQTL MQKLQETIKN
201: LETKSSPVEE LSQILKRADN FLHFILQTAP VVIGHQDKEL RYRFIYNHFP SLEGEEIIGK TDVEIFDGDG VKEIQDFKRE VLERGLPAKR EMTFDTPLFG
301: AKTFLIYVEP VFSKEGEKIG VNYMGMDVTD QVAKREKMVK LREEMAVQKA KETELNRTIH ITEETMRAKQ MLATMSHEIR SPLTGVVSMA EILSTTKLDK
401: EQRHLLDVML SSGDLVLQLI NDILDLSKVE SGAMKLEATK FRPREVVRHV LQTAAASLKK NLTLEGHVGD EVPTKILKSD SHNSTSVANS VRSKCAGQKS
501: GSCILNVNFN WLLSVIGDVL RIRQILTNLI SNAIKFTHEG KVGINLDVVS EKYPGFREEQ LKRASLIDDE QDNHSQHENI VWLRCDVYDT GIGIPEKALP
601: SLFRKYMQAS ADHARKYGGT GLGLAICKQL VGLMGGNLTV TSQENHGSTF TFILPFKPRK LIDSVSKKSA SPPDEECTDA KQGFTVHKFD NSNMDHCRIK
701: KIDQSEWHDK ENGNAQCLPN SRSPKILLVE DNKINVMVAQ TMMKQLGHKI DVVNNGLEAI RALQHFHYDL ILMDVYMPVM DGLQATRLIR SFEEHGCWDA
801: SVVIRDEHAT PRSDLSPYYP AAGQCRKRIP IIAMTANAIT ESAADCLASG MDSFISKPVT FQNLRQCLQQ YLPC

Best Arabidopsis Sequence Match ( AT5G10720.1 )
(BLAST)

001: MVCEMETDQI EEMDVEVLSS MWPEDVGTEA DKQFNVEKPA GDLDTLKEVT IETRTIADMT RLPNLLNSTH QGSSQLTNLV KQWEYMQDNA VRLLKEELKN
101: LDRQREEAEA KELKIIEEYK FESNEPENVP VLDETSDLFR RFRQKKRDAL VDSKKIEIYE EFDTVAYWKQ KALSLEKMLE ASTERERRLM EKLSESLKTM
201: ESQSAPVQEL TQNLKRAEGF LHFILQNAPI VMGHQDKDLR YLFIYNKYPS LREQDILGKT DVEIFHGGGV KESEDFKREV LEKGKASKRE ITFTTDLFGS
301: KTFLIYVEPV YNKAGEKIGI NYMGMEVTDQ VVKREKMAKL REDNAVRKAM ESELNKTIHI TEETMRAKQM LATMSHEIRS PLSGVVGMAE ILSTTKLDKE
401: QRQLLNVMIS SGDLVLQLIN DILDLSKVES GVMRLEATKF RPREVVKHVL QTAAASLKKS LTLEGNIADD VPIEVVGDVL RIRQILTNLI SNAIKFTHEG
501: NVGIKLQVIS EPSFVRDNAL NADTEEHEQN GLTETSVWIC CDVWDTGIGI PENALPCLFK KYMQASADHA RKYGGTGLGL AICKQLVELM GGQLTVTSRV
601: SEGSTFTFIL PYKVGRSDDY SDDQDEFSDM ADQQSEPDDT AEGYFQFKPL LGSIYSNGGP GISNDFLPHK VMLTSPIKLI NGFVADPSNN TGQSEMLQLE
701: NGGYMDESKL ETSSGHCPES AHQYENGNGR CFSKESESCS SSQASSEGGT LEMESELTVS SHREEEKAET EVKETSKPKI LLVEDNKINI MVAKSMMKQL
801: GHTMDIANNG VEAITAINSS SYDLVLMDVC MPVLDGLKAT RLIRSYEETG NWNAAIEAGV DISTSENEQV CMRPTNRLPI IAMTANTLAE SSEECYANGM
901: DSFISKPVTL QKLRECLQQY LH

Arabidopsis Description

AHK5Histidine kinase 5 [Source:UniProtKB/Swiss-Prot;Acc:Q3S4A7]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.