CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, golgi, plasma membrane

Predictor Summary:

extracellular 5
endoplasmic reticulum 6
vacuole 5
plasma membrane 6
golgi 6

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, golgi, plasma membrane
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	golgi

PPI

Inferred distinct locusB in Crop

locusB	locations
CDX74635
CDX85268
CDX86370
CDY00096
CDY19286
CDY19992
CDY37282
CDY47297

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G27320.1	CDY19286	AT3G21510.1	16965536
AT1G27320.1	CDY37282	AT3G21510.1	16965536
AT1G27320.1	CDX85268	AT3G29350.1	16965536
AT1G27320.1	CDX86370	AT3G29350.1	16965536
AT1G27320.1	CDY00096	AT3G29350.1	16965536
AT1G27320.1	CDY19992	AT3G29350.1	16965536
AT1G27320.1	CDX74635	AT5G35750.1	16965536
AT1G27320.1	CDY47297	AT5G35750.1	16965536

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra030037.1-P	Field mustard	endoplasmic reticulum, golgi, plasma membrane	99.31	99.7
CDY03909	Canola	endoplasmic reticulum, golgi, plasma membrane	94.12	96.0
AT1G27320.1	Thale cress	endoplasmic reticulum, golgi, plasma membrane	85.99	84.75
PGSC0003DMT400084727	Potato	cytosol, golgi, plasma membrane	38.39	72.86
VIT_01s0010g03780.t01	Wine grape	endoplasmic reticulum, golgi, plasma membrane	71.3	70.07
KRH42680	Soybean	plasma membrane	68.17	67.57
KRH58780	Soybean	endoplasmic reticulum, golgi, plasma membrane	67.97	67.38
Solyc05g015610.2.1	Tomato	endoplasmic reticulum, golgi, plasma membrane	66.8	66.09
GSMUA_AchrUn_...	Banana	endoplasmic reticulum, peroxisome, plasma membrane	60.53	63.38
GSMUA_AchrUn_...	Banana	cytosol, golgi, plasma membrane	60.04	61.42
GSMUA_Achr4P15980_001	Banana	cytosol	59.26	60.62
TraesCS3D01G426600.1	Wheat	plasma membrane	57.1	58.59
Zm00001d042312_P003	Maize	golgi, mitochondrion, plasma membrane	57.79	58.59
KXG34012	Sorghum	cytosol, peroxisome, plasma membrane	57.3	58.21
Os01t0923700-04	Rice	endoplasmic reticulum, golgi, peroxisome	58.28	58.16
TraesCS3A01G433200.1	Wheat	peroxisome	57.1	58.13
TraesCS3B01G469000.1	Wheat	cytosol, golgi, mitochondrion, peroxisome	56.42	57.09
Zm00001d012005_P002	Maize	plasma membrane	57.69	56.42
HORVU3Hr1G094870.10	Barley	plasma membrane	56.81	55.4
VIT_04s0008g03460.t01	Wine grape	plastid	18.22	55.36
CDY03102	Canola	cytosol	3.82	54.17
CDY03106	Canola	cytosol	3.72	52.78
CDY17631	Canola	cytosol, peroxisome, plasma membrane	50.54	49.05
CDY03101	Canola	cytosol, peroxisome, plasma membrane	50.44	48.95
CDX93074	Canola	plasma membrane	52.01	48.4
CDY50037	Canola	endoplasmic reticulum, golgi, plasma membrane	52.01	48.32
CDX74635	Canola	cytosol, golgi, plasma membrane	52.6	46.74
CDY47297	Canola	plasma membrane	52.4	46.56
CDY64702	Canola	mitochondrion	3.82	29.77
CDY49629	Canola	cytosol	3.04	22.3
CDY67688	Canola	nucleus	19.88	22.28
CDX97049	Canola	nucleus	19.49	22.21
CDY40112	Canola	nucleus	19.88	22.16
CDX69808	Canola	nucleus	19.49	22.16
CDY21123	Canola	cytosol	6.46	22.0
CDY66567	Canola	cytosol	3.13	21.92
CDY49633	Canola	cytosol	15.67	21.77
CDY07498	Canola	cytosol	15.57	21.6
CDX78398	Canola	cytosol	13.22	21.5
CDX80113	Canola	plasma membrane	12.34	20.55
CDY63851	Canola	plasma membrane	12.05	19.74
CDY30004	Canola	plasma membrane	13.91	18.54
CDX90318	Canola	cytosol	5.48	18.18
CDY70443	Canola	plasma membrane	13.42	17.56
CDY35503	Canola	plasma membrane	13.32	17.46
CDY01193	Canola	endoplasmic reticulum, golgi, plasma membrane	18.22	17.42
CDY24380	Canola	nucleus	20.27	17.34
CDY12735	Canola	endoplasmic reticulum, golgi, plasma membrane	18.02	17.28
CDY20843	Canola	nucleus	20.18	17.27
CDX80103	Canola	endoplasmic reticulum, golgi, plasma membrane	18.81	17.25
CDY55381	Canola	endoplasmic reticulum, plasma membrane, plastid	18.51	16.55
CDX70367	Canola	endoplasmic reticulum, golgi	19.88	14.8
CDY67999	Canola	plasma membrane	8.62	14.22
CDX86641	Canola	endoplasmic reticulum	8.23	14.12
CDY70681	Canola	endoplasmic reticulum	8.52	14.1
CDX78397	Canola	cytosol	5.19	13.77
CDY15498	Canola	plasma membrane	11.26	6.73

Protein Annotations

Gene3D:1.10.287.130	MapMan:11.4.2.1	Gene3D:3.30.450.350	Gene3D:3.40.50.2300	GO:A0A078FS93	UniProt:A0A078FS93
EnsemblPlants:CDY15717	ProteinID:CDY15717	ProteinID:CDY15717.1	InterPro:CHASE_dom	InterPro:CheY-like_superfamily	ncoils:Coil
GO:GO:0000155	GO:GO:0000160	GO:GO:0003674	GO:GO:0003824	GO:GO:0004871	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0006139	GO:GO:0006464	GO:GO:0007154	GO:GO:0007165
GO:GO:0008150	GO:GO:0008152	GO:GO:0009116	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021
GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	GO:GO:0016772	GO:GO:0019538	GO:GO:0023014
GO:GO:0038023	EnsemblPlantsGene:GSBRNA2T00089943001	InterPro:HATPase_C	InterPro:HATPase_C_sf	InterPro:HisK_dim/P	InterPro:HisK_dim/P_sf
InterPro:His_kinase_dom	InterPro:IPR001789	InterPro:IPR005467	InterPro:IPR006189	InterPro:IPR036890	PFAM:PF00072
PFAM:PF00512	PFAM:PF02518	PFAM:PF03924	PRINTS:PR00344	InterPro:PRibTrfase_dom	PFscan:PS50109
PFscan:PS50110	PFscan:PS50839	PANTHER:PTHR43719	PANTHER:PTHR43719:SF14	SMART:SM00387	SMART:SM00388
SMART:SM00448	SMART:SM01079	SUPFAM:SSF47384	SUPFAM:SSF52172	SUPFAM:SSF55874	InterPro:Sig_transdc_His_kin-like_C
InterPro:Sig_transdc_resp-reg_receiver	TMHMM:TMhelix	UniParc:UPI0004EEA859	SEG:seg	:	:

Description

BnaA07g08880DBnaA07g08880D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FS93]

Coordinates

chrLK032056:-:723725..728511

Molecular Weight (calculated)

114693.0 Da

IEP (calculated)

7.234

GRAVY (calculated)

-0.160

Length

1021 amino acids

Sequence
(BLAST)

0001: MSLFHVLGFC LKIGQLFWML CCWFLSWFLS WFLDADKSPL DPDKTKMKNH NKMCFLWNKI STSGLKIPPS FSHHLFGSVR FGKTFWRKVL VAWVVSWVLI
0101: SFWTFWCLTS QAMAKRKETL ASMCDERARM LQDQFNVSMN HVQAMSILIS TFHHSKFPSA IDQRTFSEYT DRTSFERPLT SGVAYAVRVL HSERQEFERQ
0201: QGWTIRRMEQ NPVHKDDYDT EALEPSPVQQ EYAPVIFAQD TVSHVISLDM LSGKEDRENV LRARRSGKGV LTAPFPLIKT NRLGVILTFA VYKRDLPSNA
0301: TPNERIEATN GYLGGVFDIE TLVENLLQQL ASKQTILVNV YDTTNHSQPI SMYGSHVSAD GLEHVSPLNF GDPFRKHEMR CRFKQKPPWP VQSMVTSFGI
0401: LVIALLVAHI FHATLSRIRR AEEDCHKMEL LKKKAEAADV AKSQFLATVS HEIRTPMNGV LGMLHMLMDT ELDVTQQDYV RTAQASGKAL VSLINEVLDQ
0501: AKIESGKVEL EEVRFDLRGI LDDVLSLFSG KSQEKGLELA VYISDRVPEM LIGDPGRFRQ ILTNLMGNSI KFTEKGHIFV TVHLVEELLD SSDVETSSSS
0601: STENTLSGLP VADRKRSWQN FKAFSSNGHR SLALAPSEIN LVVSVEDTGV GIPVEAQSRI FTPFMQVGPS ISRTHGGTGI GLSISKCLVG LMKGEIGFSS
0701: TPKVGSTFTF TVVFANGVHS TERKSELHNN NQPEFEGMNA VLVDHRPARA QVSWYHFQRL GIRVEVVTSV DQALRFMKTY ATTVNMILIE QEVWNKEADV
0801: FVKDPLVHSP KLFLLANSID TSVSDTLSNV IDPPVLIVKP LRASMLAATL QRGLGIGKRE TPQRKGPPAL ILRNLLLGRK ILIVDDNNVN LRVAAGALKK
0901: YGADVVCAES GVKAVSLLKP PHEFDACFMD IQMPEMDGFE ATRRIRGMEE EMNNGEALTV EEGKRSRWHL PVLAMTADVI QATQEECLKC GMDGYVSKPF
1001: EAEQLYREVS RFFNSPSDTE S

Best Arabidopsis Sequence Match ( AT1G27320.1 )
(BLAST)

0001: MSLFHVLGFG VKIGHLFWML CCWFVSWFVD NGIEDKSGLL VGSVGDLEKT KMTTLKKKNK MWFWNKISSS GLKIPSFSYQ FLGSVKFNKA WWRKLVVVWV
0101: VFWVLVSIWT FWYFSSQAME KRKETLASMC DERARMLQDQ FNVSMNHVQA MSILISTFHH GKIPSAIDQR TFSEYTDRTS FERPLTSGVA YAMRVLHSER
0201: EEFERQQGWT IRKMYSLEQN PVHKDDYDLE ALEPSPVQEE YAPVIFAQDT VSHVVSLDML SGKEDRENVL RARSSGKGVL TAPFPLIKTN RLGVILTFAV
0301: YKRDLPSNAT PKERIEATNG YLGGVFDIES LVENLLQQLA SKQTILVNVY DITNHSQPIS MYGTNVSADG LERVSPLIFG DPLRKHEMRC RFKQKPPWPV
0401: LSMVTSFGIL VIALLVAHII HATVSRIHKV EEDCDKMKQL KKKAEAADVA KSQFLATVSH EIRTPMNGVL GMLHMLMDTE LDVTQQDYVR TAQASGKALV
0501: SLINEVLDQA KIESGKLELE EVRFDLRGIL DDVLSLFSSK SQQKGVELAV YISDRVPDML IGDPGRFRQI LTNLMGNSIK FTEKGHIFVT VHLVDELFES
0601: IDGETASSPE STLSGLPVAD RQRSWENFKA FSSNGHRSFE PSPPDINLIV SVEDTGVGIP VEAQSRIFTP FMQVGPSISR THGGTGIGLS ISKCLVGLMK
0701: GEIGFSSTPK VGSTFTFTAV FSNGMQPAER KNDNNQPIFS EFRGMKAVVV DHRPARAKVS WYHFQRLGIR VEVVPRVEQA LHYLKIGTTT VNMILIEQEI
0801: WNREADDFIK KLQKDPLFLS PKLILLANSV ESSISEALCT GIDPPIVIVK PLRASMLAAT LQRGLGIGIR EPPQHKGPPA LILRNLLLGR KILIVDDNNV
0901: NLRVAAGALK KYGADVVCAE SGIKAISLLK PPHEFDACFM DIQMPEMDGF EATRRIRDME EEMNKRIKNG EALIVENGNK TSWHLPVLAM TADVIQATHE
1001: ECLKCGMDGY VSKPFEAEQL YREVSRFFNS PSDTES

Arabidopsis Description

AHK3HK3 [Source:UniProtKB/TrEMBL;Acc:A0A178WL02]
SUBAcon: [endoplasmic reticulum,golgi,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.