CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 2
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d033786_P004	Maize	plasma membrane	93.27	93.18
Os03t0717700-01	Rice	cytosol, mitochondrion, plasma membrane	83.53	82.79
TraesCS4A01G264800.1	Wheat	cytosol, peroxisome, plasma membrane	80.02	79.78
TraesCS4D01G050400.1	Wheat	cytosol	79.72	79.72
TraesCS4B01G050200.1	Wheat	cytosol	80.42	79.46
HORVU4Hr1G008210.4	Barley	cytosol	80.02	79.38
GSMUA_Achr10P...	Banana	cytosol	63.96	72.14
GSMUA_Achr7P11260_001	Banana	mitochondrion	64.46	70.47
EES07292	Sorghum	mitochondrion	60.34	61.77
PGSC0003DMT400075775	Potato	endoplasmic reticulum, golgi, plasma membrane	59.34	59.58
VIT_01s0011g06190.t01	Wine grape	mitochondrion	62.45	59.29
Solyc04g008110.2.1	Tomato	plasma membrane	58.94	59.11
KRH49704	Soybean	endoplasmic reticulum, golgi, mitochondrion, plasma membrane	58.03	58.56
KRH60456	Soybean	golgi	58.73	57.86
KRH41756	Soybean	golgi	58.73	57.58
KRH70376	Soybean	endoplasmic reticulum, golgi, mitochondrion, plasma membrane	58.13	56.82
Bra024849.1-P	Field mustard	cytosol, peroxisome, plasma membrane	59.04	56.54
CDY17631	Canola	cytosol, peroxisome, plasma membrane	59.14	55.99
CDY03101	Canola	cytosol, peroxisome, plasma membrane	59.04	55.89
AT2G01830.2	Thale cress	cytosol	59.14	54.54
CDY03102	Canola	cytosol	3.71	51.39
CDY03106	Canola	cytosol	3.61	50.0
KRH49494	Soybean	mitochondrion	31.12	49.76
KXG34012	Sorghum	cytosol, peroxisome, plasma membrane	48.69	48.26
EER91030	Sorghum	cytosol	13.96	21.89
OQU76804	Sorghum	nucleus	19.98	20.75
EES19059	Sorghum	plasma membrane	12.95	20.41
EER94128	Sorghum	extracellular, plasma membrane	14.96	20.05
KXG26059	Sorghum	endoplasmic reticulum, extracellular, golgi	10.94	19.26
KXG19481	Sorghum	plasma membrane	20.38	18.61
OQU85974	Sorghum	plasma membrane	13.35	17.14
EES10426	Sorghum	plasma membrane	13.25	17.08
EES06508	Sorghum	mitochondrion, plasma membrane	12.15	14.63
KXG36402	Sorghum	plasma membrane	12.35	14.39

Protein Annotations

Gene3D:1.10.287.130	MapMan:11.4.2.1	Gene3D:3.30.450.350	Gene3D:3.40.50.2300	EntrezGene:8060004	ProteinID:AHZ44512.1
ProteinID:AHZ44513.1	ProteinID:AHZ44514.1	ProteinID:AHZ44515.1	ProteinID:AHZ44516.1	ProteinID:AHZ44517.1	UniProt:C5WN04
InterPro:CHASE_dom	InterPro:CheY-like_superfamily	ncoils:Coil	EnsemblPlants:EER93561	ProteinID:EER93561	ProteinID:EER93561.1
GO:GO:0000155	GO:GO:0000160	GO:GO:0003674	GO:GO:0003824	GO:GO:0004673	GO:GO:0004871
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0006464
GO:GO:0006468	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016020	GO:GO:0016021	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	GO:GO:0016772
GO:GO:0018106	GO:GO:0019538	GO:GO:0019955	GO:GO:0023014	GO:GO:0038023	InterPro:HATPase_C
InterPro:HATPase_C_sf	InterPro:HisK_dim/P	InterPro:HisK_dim/P_sf	InterPro:His_kinase_dom	InterPro:IPR001789	InterPro:IPR005467
InterPro:IPR006189	InterPro:IPR036890	PFAM:PF00072	PFAM:PF00512	PFAM:PF02518	PFAM:PF03924
PRINTS:PR00344	PFscan:PS50109	PFscan:PS50110	PFscan:PS50839	PANTHER:PTHR43719	PANTHER:PTHR43719:SF2
SMART:SM00387	SMART:SM00388	SMART:SM00448	SMART:SM01079	EnsemblPlantsGene:SORBI_3001G113200	SUPFAM:SSF47384
SUPFAM:SSF52172	SUPFAM:SSF55874	InterPro:Sig_transdc_His_kin-like_C	InterPro:Sig_transdc_resp-reg_receiver	TMHMM:TMhelix	UniParc:UPI0001A8283A
RefSeq:XP_002466563.1	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr1:-:8870885..8878359

Molecular Weight (calculated)

109160.0 Da

IEP (calculated)

5.550

GRAVY (calculated)

-0.090

Length

996 amino acids

Sequence
(BLAST)

001: MGVGGGGEAA AASAAPAEEA AAAGKDGEEG TRWTMKEKLI AAAVLLWMLV AATIGVFLHW SIRHAALRKE EEGLVSMCEE RARMLQDQFA VSVNHVHALA
101: ILVATFHYEK HPPALDQDTF AEYTARTSFE RPLLSGVAYA QRVEHADREG FERQQGWIIK TMKHEPSPVQ DEYAPVVYSQ ETVSYIEGLD MMSGEEDREN
201: ILRSRASGKA VLTRPFRLMS NHLGVVLTFP VYHVDLPPDA KEEERVAATA GYLGGSFDVE SLVENLLRQL AGNQELVVNV YDVTNSSDPL VMYGSEVPLG
301: IPSPWHICML DFGDPFRKHH MVCRYRNKPP LPWSAISTPS GVFVICMLVG YIVFAAWSRY DNVKEDCRKM EELKKQAEAA DVAKSQFLAT VSHEIRTPMN
401: GVLGMLDMLL DTDLTSTQRD FAQTAQVCGK ALISLINEVL DRAKIEAGKL DLESVPFDLR SILDDVIALF SSKSREKGIE LAVYVSERVP EILLGDPGRF
501: RQIITNLVGN SIKFTERGHI FVQVHLADHS NLATESEVEP VANGMNGHKD EKTAVATGVS LNTLSGFEAA DSRNSWENFK LLLSYEKNEM PYESVSDKVT
601: LVVSVEDTGI GIPLDAQAKV FTPFMQADSS TSRTYGGTGI GLSISQCLVE LMGGQINFVS RPQVGSTFTF TAVLQRCDRS AIGDSKPVML HPLPSSFKGL
701: SALLVDTRPV RATVTKYHLQ RLGIACDVVA TIDLALGVLS GRNGSSLTST KQPCMLLIES DSWGFKIDVS LRSRLLEMKQ DGHTNLLPKI ILLAAAESSK
801: LKAHYAVDSV ITKPLKASAL AACLFQTLGI TQSSNERRDN SGSLHGLLLG KNILVVDDNK VNLRVAAGTL KKFGAKVECV ESGKDALALL QVPYKFHLCL
901: MDIQMPEMDG FEATQQIRTM EAKANEQAVA CDDSETDGAT RAAKWHLPVL AMTADVIQAT HEECTKYGMD GYVTKPFEEK QLFQALQKFL DPGMSS

Best Arabidopsis Sequence Match ( AT2G01830.3 )
(BLAST)

0001: MNWALNNHQE EEEEPRRIEI SDSESLENLK SSDFYQLGGG GALNSSEKPR KIDFWRSGLM GFAKMQQQQQ LQHSVAVKMN NNNNNDLMGN KKGSTFIQEH
0101: RALLPKALIL WIIIVGFISS GIYQWMDDAN KIRREEVLVS MCDQRARMLQ DQFSVSVNHV HALAILVSTF HYHKNPSAID QETFAEYTAR TAFERPLLSG
0201: VAYAEKVVNF EREMFERQHN WVIKTMDRGE PSPVRDEYAP VIFSQDSVSY LESLDMMSGE EDRENILRAR ETGKAVLTSP FRLLETHHLG VVLTFPVYKS
0301: SLPENPTVEE RIAATAGYLG GAFDVESLVE NLLGQLAGNQ AIVVHVYDIT NASDPLVMYG NQDEEADRSL SHESKLDFGD PFRKHKMICR YHQKAPIPLN
0401: VLTTVPLFFA IGFLVGYILY GAAMHIVKVE DDFHEMQELK VRAEAADVAK SQFLATVSHE IRTPMNGILG MLAMLLDTEL SSTQRDYAQT AQVCGKALIA
0501: LINEVLDRAK IEAGKLELES VPFDIRSILD DVLSLFSEES RNKSIELAVF VSDKVPEIVK GDSGRFRQII INLVGNSVKF TEKGHIFVKV HLAEQSKDES
0601: EPKNALNGGV SEEMIVVSKQ SSYNTLSGYE AADGRNSWDS FKHLVSEEQS LSEFDISSNV RLMVSIEDTG IGIPLVAQGR VFMPFMQADS STSRNYGGTG
0701: IGLSISKCLV ELMRGQINFI SRPHIGSTFW FTAVLEKCDK CSAINHMKKP NVEHLPSTFK GMKAIVVDAK PVRAAVTRYH MKRLGINVDV VTSLKTAVVA
0801: AAAFERNGSP LPTKPQLDMI LVEKDSWIST EDNDSEIRLL NSRTNGNVHH KSPKLALFAT NITNSEFDRA KSAGFADTVI MKPLRASMIG ACLQQVLELR
0901: KTRQQHPEGS SPATLKSLLT GKKILVVDDN IVNRRVAAGA LKKFGAEVVC AESGQVALGL LQIPHTFDAC FMDIQMPQMD GFEATRQIRM MEKETKEKTN
1001: LEWHLPILAM TADVIHATYE ECLKSGMDGY VSKPFEEENL YKSVAKSFKP NPISPSS

Arabidopsis Description

AHK4Histidine kinase 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9C5U0]
SUBAcon: [peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.