Factsheet for Solyc01g080540.2.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus, cytosol

Predictor Summary:

nucleus 3
cytosol 1
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Solyc03g113720.2.1
Solyc05g006420.2.1
Solyc05g015610.2.1
Solyc07g047770.2.1
Solyc07g056580.2.1
Solyc10g079600.1.1
Solyc10g079700.1.1
Solyc12g011330.2.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G21510.1	Solyc05g006420.2.1	AT1G10470.1	10930573
AT3G21510.1	Solyc05g006420.2.1	AT1G10470.1	16965536
AT3G21510.1	Solyc03g113720.2.1	AT1G19050.1	16965536
AT3G21510.1	Solyc03g113720.2.1	AT1G19050.1	18642946
AT3G21510.1	Solyc05g015610.2.1	AT1G27320.1	16965536
AT3G21510.1	Solyc07g056580.2.1	AT1G66340.1	10930573
AT3G21510.1	Solyc12g011330.2.1	AT1G66340.1	10930573
AT3G21510.1	Solyc07g056580.2.1	AT1G66340.1	18384742
AT3G21510.1	Solyc12g011330.2.1	AT1G66340.1	18384742
AT3G21510.1	Solyc10g079600.1.1	AT2G41310.1	16965536
AT3G21510.1	Solyc10g079700.1.1	AT2G41310.1	16965536
AT3G21510.1	Solyc10g079600.1.1	AT2G41310.1	18642946
AT3G21510.1	Solyc10g079700.1.1	AT2G41310.1	18642946
AT3G21510.1	Solyc03g113720.2.1	AT3G48100.1	16965536
AT3G21510.1	Solyc10g079600.1.1	AT3G57040.1	10930573
AT3G21510.1	Solyc10g079700.1.1	AT3G57040.1	10930573
AT3G21510.1	Solyc10g079600.1.1	AT3G57040.1	16965536
AT3G21510.1	Solyc10g079700.1.1	AT3G57040.1	16965536
AT3G21510.1	Solyc07g047770.2.1	AT5G35750.1	16965536

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400081747	Potato	cytosol, nucleus, plastid	97.35	97.35
VIT_05s0020g02210.t01	Wine grape	cytosol	79.47	78.95
KRH20965	Soybean	cytosol	77.48	75.48
KRH11296	Soybean	cytosol	77.48	75.48
KRH50948	Soybean	cytosol	75.5	73.55
Solyc01g098400.2.1	Tomato	cytosol, nucleus, plastid	68.87	70.27
GSMUA_Achr11P...	Banana	cytosol	68.87	68.87
AT3G21510.1	Thale cress	cytosol, nucleus, plastid	69.54	68.18
CDY37282	Canola	cytosol, nucleus, plastid	68.21	66.88
Bra023876.1-P	Field mustard	cytosol, nucleus, plastid	68.21	66.88
CDY19286	Canola	cytosol	67.55	66.23
Solyc06g084410.2.1	Tomato	cytosol	49.67	62.5
GSMUA_Achr7P14570_001	Banana	cytosol	56.29	55.92
GSMUA_AchrUn_...	Banana	cytosol	54.3	53.95
GSMUA_Achr7P14620_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	53.64	53.29
Solyc08g066350.1.1	Tomato	cytosol, mitochondrion, nucleus	41.72	46.32
Solyc03g116720.1.1	Tomato	cytosol	35.1	46.09
Solyc11g070150.1.1	Tomato	nucleus	41.72	45.99

Protein Annotations

Gene3D:1.20.120.160	MapMan:11.4.2.2	GO:GO:0000160	GO:GO:0003674	GO:GO:0003824	GO:GO:0004871
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0005737	GO:GO:0006464	GO:GO:0006468	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150
GO:GO:0008152	GO:GO:0009719	GO:GO:0009736	GO:GO:0009927	GO:GO:0009987	GO:GO:0016301
GO:GO:0016310	GO:GO:0016740	GO:GO:0019538	GO:GO:0043424	InterPro:HPT_dom_sf	InterPro:IPR008207
InterPro:IPR036641	UniProt:K4AXU8	PFAM:PF01627	PFscan:PS50894	PANTHER:PTHR28242	PANTHER:PTHR28242:SF24
SUPFAM:SSF47226	InterPro:Sig_transdc_His_kin_Hpt_dom	EnsemblPlantsGene:Solyc01g080540.2	EnsemblPlants:Solyc01g080540.2.1	UniParc:UPI000276253A	SEG:seg

Description

Histidine-containing phosphotransfer protein 1 [Source:Projected from Arabidopsis thaliana (AT3G21510) UniProtKB/Swiss-Prot;Acc:Q9ZNV9]

Coordinates

chr1:+:79788391..79790651

Molecular Weight (calculated)

17183.5 Da

IEP (calculated)

4.342

GRAVY (calculated)

-0.185

Length

151 amino acids

Sequence
(BLAST)

001: MEVGQLQRSF VEYMASLFRE GFLDGQFSQL QQLQDDSNPE FVVEVVSLFF EDSERLLNDL TMALDQPNVD FKQVDAHVHQ LKGSSSSVGA QRVKNCCVLF
101: RNCCEEQNTE ACLRCLQQIK QEYLLVKNKL QTLFELEQQI VAAGGAIPMV Q

Best Arabidopsis Sequence Match ( AT3G21510.1 )
(BLAST)

001: MDLVQKQKSL QDYTKSLFLE GILDSQFLQL QQLQDESNPD FVSQVVTLFF QDSDRILNDL SLSLDQQVVD FKKVDPHVHQ LKGSSSSIGA QRVKNACVVF
101: RSFCEQQNVE ACHRCLQQVK QEYYLVKNRL ETLFKLEQQI VASGGMIPAV ELGF

Arabidopsis Description

AHP1AHP1 [Source:UniProtKB/TrEMBL;Acc:A0A178V856]
SUBAcon: [plastid,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.