Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 1
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY19286 | Canola | cytosol | 95.45 | 95.45 |
| Bra023876.1-P | Field mustard | cytosol, nucleus, plastid | 94.81 | 94.81 |
| CDY37282 | Canola | cytosol, nucleus, plastid | 94.81 | 94.81 |
| KRH11296 | Soybean | cytosol | 74.68 | 74.19 |
| KRH20965 | Soybean | cytosol | 74.03 | 73.55 |
| Solyc01g080540.2.1 | Tomato | cytosol, nucleus, plastid | 68.18 | 69.54 |
| PGSC0003DMT400081747 | Potato | cytosol, nucleus, plastid | 68.18 | 69.54 |
| VIT_05s0020g02210.t01 | Wine grape | cytosol | 68.18 | 69.08 |
| KRH50948 | Soybean | cytosol | 69.48 | 69.03 |
| GSMUA_Achr11P... | Banana | cytosol | 63.64 | 64.9 |
| GSMUA_Achr7P14570_001 | Banana | cytosol | 53.9 | 54.61 |
| GSMUA_Achr7P14620_001 | Banana | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 51.3 | 51.97 |
| GSMUA_AchrUn_... | Banana | cytosol | 50.0 | 50.66 |
| AT3G29350.1 | Thale cress | cytosol | 49.35 | 48.72 |
| AT1G03430.2 | Thale cress | cytosol | 47.4 | 46.5 |
| AT3G16360.2 | Thale cress | nucleus | 38.31 | 40.69 |
| AT1G80100.3 | Thale cress | cytosol, extracellular, nucleus | 42.21 | 40.62 |
| AT5G39340.2 | Thale cress | extracellular, plasma membrane | 53.25 | 40.2 |
| AT4G04402.1 | Thale cress | extracellular | 32.47 | 29.94 |
Protein Annotations
| Gene3D:1.20.120.160 | MapMan:11.4.2.2 | PDB:4EUK | EntrezGene:821705 | UniProt:A0A178V856 | EMBL:AB012570 |
| EMBL:AB015141 | ProteinID:AEE76518.1 | EMBL:AF370265 | Symbol:AHP1 | ArrayExpress:AT3G21510 | EnsemblPlantsGene:AT3G21510 |
| RefSeq:AT3G21510 | TAIR:AT3G21510 | RefSeq:AT3G21510-TAIR-G | EnsemblPlants:AT3G21510.1 | TAIR:AT3G21510.1 | EMBL:AY063082 |
| ProteinID:BAB02346.1 | GO:GO:0000160 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004871 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005737 |
| GO:GO:0005829 | GO:GO:0006464 | GO:GO:0006468 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009719 | GO:GO:0009736 | GO:GO:0009927 | GO:GO:0009987 | GO:GO:0016301 |
| GO:GO:0016310 | GO:GO:0016740 | GO:GO:0019538 | GO:GO:0043424 | InterPro:HPT_dom_sf | InterPro:IPR008207 |
| InterPro:IPR036641 | RefSeq:NP_188788.1 | ProteinID:OAP02369.1 | PFAM:PF01627 | PO:PO:0000013 | PO:PO:0000037 |
| PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 |
| PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 |
| PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 |
| PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 |
| PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 |
| PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | PFscan:PS50894 | PANTHER:PTHR28242 | PANTHER:PTHR28242:SF5 |
| UniProt:Q9ZNV9 | SUPFAM:SSF47226 | InterPro:Sig_transdc_His_kin_Hpt_dom | UniParc:UPI00000A95D5 | SEG:seg | : |
Description
AHP1AHP1 [Source:UniProtKB/TrEMBL;Acc:A0A178V856]
Coordinates
chr3:-:7577712..7579789
Molecular Weight (calculated)
17616.1 Da
IEP (calculated)
5.197
GRAVY (calculated)
-0.237
Length
154 amino acids
Sequence
(BLAST)
(BLAST)
001: MDLVQKQKSL QDYTKSLFLE GILDSQFLQL QQLQDESNPD FVSQVVTLFF QDSDRILNDL SLSLDQQVVD FKKVDPHVHQ LKGSSSSIGA QRVKNACVVF
101: RSFCEQQNVE ACHRCLQQVK QEYYLVKNRL ETLFKLEQQI VASGGMIPAV ELGF
101: RSFCEQQNVE ACHRCLQQVK QEYYLVKNRL ETLFKLEQQI VASGGMIPAV ELGF
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.