Factsheet for PGSC0003DMT400081747

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus, cytosol

Predictor Summary:

nucleus 3
cytosol 1
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
PGSC0003DMT400007618
PGSC0003DMT400015729
PGSC0003DMT400020285
PGSC0003DMT400058306
PGSC0003DMT400063187
PGSC0003DMT400071109
PGSC0003DMT400076726
PGSC0003DMT400076758
PGSC0003DMT400084727

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G21510.1	PGSC0003DMT400058306	AT1G10470.1	10930573
AT3G21510.1	PGSC0003DMT400058306	AT1G10470.1	16965536
AT3G21510.1	PGSC0003DMT400063187	AT1G19050.1	16965536
AT3G21510.1	PGSC0003DMT400063187	AT1G19050.1	18642946
AT3G21510.1	PGSC0003DMT400084727	AT1G27320.1	16965536
AT3G21510.1	PGSC0003DMT400020285	AT1G66340.1	10930573
AT3G21510.1	PGSC0003DMT400071109	AT1G66340.1	10930573
AT3G21510.1	PGSC0003DMT400020285	AT1G66340.1	18384742
AT3G21510.1	PGSC0003DMT400071109	AT1G66340.1	18384742
AT3G21510.1	PGSC0003DMT400007618	AT2G41310.1	16965536
AT3G21510.1	PGSC0003DMT400076726	AT2G41310.1	16965536
AT3G21510.1	PGSC0003DMT400076758	AT2G41310.1	16965536
AT3G21510.1	PGSC0003DMT400007618	AT2G41310.1	18642946
AT3G21510.1	PGSC0003DMT400076726	AT2G41310.1	18642946
AT3G21510.1	PGSC0003DMT400076758	AT2G41310.1	18642946
AT3G21510.1	PGSC0003DMT400063187	AT3G48100.1	16965536
AT3G21510.1	PGSC0003DMT400007618	AT3G57040.1	10930573
AT3G21510.1	PGSC0003DMT400076726	AT3G57040.1	10930573
AT3G21510.1	PGSC0003DMT400076758	AT3G57040.1	10930573
AT3G21510.1	PGSC0003DMT400007618	AT3G57040.1	16965536
AT3G21510.1	PGSC0003DMT400076726	AT3G57040.1	16965536
AT3G21510.1	PGSC0003DMT400076758	AT3G57040.1	16965536
AT3G21510.1	PGSC0003DMT400015729	AT5G35750.1	16965536

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc01g080540.2.1	Tomato	cytosol, nucleus, plastid	97.35	97.35
VIT_05s0020g02210.t01	Wine grape	cytosol	78.81	78.29
KRH20965	Soybean	cytosol	76.82	74.84
KRH11296	Soybean	cytosol	76.82	74.84
KRH50948	Soybean	cytosol	74.83	72.9
PGSC0003DMT400073603	Potato	cytosol	68.21	69.59
GSMUA_Achr11P...	Banana	cytosol	68.21	68.21
AT3G21510.1	Thale cress	cytosol, nucleus, plastid	69.54	68.18
CDY37282	Canola	cytosol, nucleus, plastid	68.87	67.53
Bra023876.1-P	Field mustard	cytosol, nucleus, plastid	68.87	67.53
CDY19286	Canola	cytosol	68.21	66.88
PGSC0003DMT400051833	Potato	cytosol	66.23	65.79
GSMUA_Achr7P14570_001	Banana	cytosol	56.29	55.92
GSMUA_AchrUn_...	Banana	cytosol	54.3	53.95
GSMUA_Achr7P14620_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	53.64	53.29
PGSC0003DMT400077451	Potato	cytosol, nucleus, plastid	42.38	47.06
PGSC0003DMT400047799	Potato	nucleus	41.72	45.99
PGSC0003DMT400001706	Potato	cytosol	45.03	43.87
PGSC0003DMT400094075	Potato	nucleus	28.48	21.18

Protein Annotations

Gene3D:1.20.120.160	EntrezGene:102590747	MapMan:11.4.2.2	GO:GO:0000160	GO:GO:0003674	GO:GO:0003824
GO:GO:0004871	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0005737	GO:GO:0006464	GO:GO:0006468	GO:GO:0007154	GO:GO:0007165
GO:GO:0008150	GO:GO:0008152	GO:GO:0009719	GO:GO:0009736	GO:GO:0009927	GO:GO:0009987
GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	GO:GO:0019538	GO:GO:0043424	InterPro:HPT_dom_sf
InterPro:IPR008207	InterPro:IPR036641	UniProt:M1D4Z9	PFAM:PF01627	EnsemblPlantsGene:PGSC0003DMG400032101	PGSC:PGSC0003DMG400032101
EnsemblPlants:PGSC0003DMT400081747	PFscan:PS50894	PANTHER:PTHR28242	PANTHER:PTHR28242:SF24	SUPFAM:SSF47226	InterPro:Sig_transdc_His_kin_Hpt_dom
UniParc:UPI0002952013	RefSeq:XP_006365269.1	RefSeq:XP_006365270.1	RefSeq:XP_006365271.1	SEG:seg	:

Description

Histidine-containing phosphotransfer protein [Source:PGSC_GENE;Acc:PGSC0003DMG400032101]

Coordinates

chr1:-:60730422..60732793

Molecular Weight (calculated)

17197.5 Da

IEP (calculated)

4.333

GRAVY (calculated)

-0.223

Length

151 amino acids

Sequence
(BLAST)

001: MEVGQLQRSF VEYMASLFRE GFLDAQFSQL QQLQDDSNPD FVVEVVSLFF EDSERLLNDL TMALDQPNVD FKQVDAHVHQ LKGSSSSVGA QRVKNCCVPF
101: RNCCEEQNTE TCLRCLQQIK QEYLLVKNKL QTLFELEQQI VAAGGAIPMV Q

Best Arabidopsis Sequence Match ( AT3G21510.1 )
(BLAST)

001: MDLVQKQKSL QDYTKSLFLE GILDSQFLQL QQLQDESNPD FVSQVVTLFF QDSDRILNDL SLSLDQQVVD FKKVDPHVHQ LKGSSSSIGA QRVKNACVVF
101: RSFCEQQNVE ACHRCLQQVK QEYYLVKNRL ETLFKLEQQI VASGGMIPAV ELGF

Arabidopsis Description

AHP1AHP1 [Source:UniProtKB/TrEMBL;Acc:A0A178V856]
SUBAcon: [plastid,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.