Factsheet for PGSC0003DMT400077451

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus, cytosol

Predictor Summary:

nucleus 3
cytosol 1
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc08g066350.1.1	Tomato	cytosol, mitochondrion, nucleus	95.59	95.59
PGSC0003DMT400047799	Potato	nucleus	69.85	69.34
GSMUA_Achr11P...	Banana	nucleus	61.76	55.26
Os05t0186100-01	Rice	nucleus	58.09	52.32
KRH52794	Soybean	cytosol, nucleus, plastid	54.41	51.75
TraesCS1B01G141500.1	Wheat	nucleus	56.62	50.99
Os01t0743800-00	Rice	cytosol, nucleus, plastid	56.62	50.99
OQU77568	Sorghum	nucleus	55.88	50.33
GSMUA_Achr10P...	Banana	nucleus	55.15	49.67
HORVU3Hr1G070880.7	Barley	cytosol	54.41	48.68
TraesCS3B01G309100.1	Wheat	cytosol	53.68	48.34
GSMUA_Achr9P16250_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	52.21	48.3
VIT_04s0008g00210.t01	Wine grape	mitochondrion	64.71	47.57
TraesCS1D01G343900.1	Wheat	cytosol, mitochondrion, nucleus, plastid	52.94	47.37
TraesCS1B01G354300.1	Wheat	cytosol, mitochondrion, nucleus, plastid	52.94	47.37
TraesCS1A01G341600.1	Wheat	cytosol, mitochondrion, nucleus, plastid	52.94	47.37
TraesCS3D01G275300.1	Wheat	cytosol	52.21	47.02
Zm00001d037694_P001	Maize	cytosol	60.29	46.07
PGSC0003DMT400073603	Potato	cytosol	49.26	45.27
EES19834	Sorghum	cytosol, nucleus, plastid	50.0	44.16
Zm00001d043505_P001	Maize	cytosol	56.62	43.26
PGSC0003DMT400081747	Potato	cytosol, nucleus, plastid	47.06	42.38
HORVU1Hr1G027980.32	Barley	mitochondrion	55.88	42.22
PGSC0003DMT400051833	Potato	cytosol	47.06	42.11
TraesCS1A01G122300.1	Wheat	nucleus	47.79	40.37
TraesCS1D01G123300.1	Wheat	nucleus	47.79	40.37
Zm00001d010791_P001	Maize	mitochondrion	47.79	38.01
OQU87518	Sorghum	cytosol	52.21	37.77
PGSC0003DMT400001706	Potato	cytosol	41.18	36.13
TraesCS3A01G275400.2	Wheat	extracellular, mitochondrion	47.79	35.91
HORVU1Hr1G075830.31	Barley	cytosol, mitochondrion, plastid	46.32	29.17
PGSC0003DMT400094075	Potato	nucleus	39.71	26.6

Protein Annotations

Gene3D:1.20.120.160	EntrezGene:102589200	MapMan:11.4.2.2	GO:GO:0000160	GO:GO:0003674	GO:GO:0004871
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150
GO:GO:0009987	InterPro:HPT_dom_sf	InterPro:IPR008207	InterPro:IPR036641	UniProt:M1CYF8	PFAM:PF01627
EnsemblPlantsGene:PGSC0003DMG400030120	PGSC:PGSC0003DMG400030120	EnsemblPlants:PGSC0003DMT400077451	PFscan:PS50894	PANTHER:PTHR28242	PANTHER:PTHR28242:SF4
SUPFAM:SSF47226	InterPro:Sig_transdc_His_kin_Hpt_dom	UniParc:UPI000294C091	RefSeq:XP_006364721.1	:	:

Description

Histidine phosphotransfer protein [Source:PGSC_GENE;Acc:PGSC0003DMG400030120]

Coordinates

chr8:-:38158429..38161496

Molecular Weight (calculated)

15895.5 Da

IEP (calculated)

4.595

GRAVY (calculated)

-0.774

Length

136 amino acids

Sequence
(BLAST)

001: MQRQAASMKR NLFNQDYLDE QFNELEELQD DDNPNFVEEV VNLFFTDSVR LIRNVDLALA NEPYDFGRLD DLMHQFKGSS SSIGAKRVKR ECSQFQEYCN
101: ERNIDGCKRA FQGVKQEYAT LKTKLDAYFQ VAREAS

Best Arabidopsis Sequence Match ( AT3G16360.2 )
(BLAST)

001: MQRQVALIKQ SLFDQGYLDE QFMELEELQD DANPNFVEEV SALYFKDSAR LINNIDQALE RGSFDFNRLD SYMHQFKGSS TSIGASKVKA ECTTFREYCR
101: AGNAEGCLRT FQQLKKEHST LRKKLEHYFQ LARQAGPKET ARRPK

Arabidopsis Description

AHP4AHP4 [Source:UniProtKB/TrEMBL;Acc:A0A178V965]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.