CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os01t0743800-00	Rice	cytosol, nucleus, plastid	65.96	82.12
HORVU3Hr1G070880.7	Barley	cytosol	63.3	78.29
TraesCS3B01G309100.1	Wheat	cytosol	62.77	78.15
TraesCS3D01G275300.1	Wheat	cytosol	62.23	77.48
Zm00001d043505_P001	Maize	cytosol	71.81	75.84
EES19834	Sorghum	cytosol, nucleus, plastid	54.79	66.88
TraesCS3A01G275400.2	Wheat	extracellular, mitochondrion	61.17	63.54
KRH47212	Soybean	cytosol, nucleus, plastid	47.34	62.24
Bra027169.1-P	Field mustard	cytosol, nucleus, plastid	40.43	61.29
CDY56195	Canola	cytosol, nucleus, plastid	40.43	61.29
CDX82406	Canola	cytosol	42.55	60.15
CDX75878	Canola	cytosol	42.02	59.4
AT3G16360.2	Thale cress	nucleus	45.74	59.31
CDY30166	Canola	cytosol	40.96	57.89
KRH23400	Soybean	nucleus	44.68	56.0
KRH09934	Soybean	nucleus	44.68	56.0
OQU77568	Sorghum	nucleus	44.15	54.97
VIT_09s0002g03520.t01	Wine grape	nucleus	43.62	54.67
KRH52794	Soybean	cytosol, nucleus, plastid	39.89	52.45
PGSC0003DMT400077451	Potato	cytosol, nucleus, plastid	37.77	52.21
KRH44276	Soybean	nucleus	45.21	52.15
Solyc08g066350.1.1	Tomato	cytosol, mitochondrion, nucleus	37.23	51.47
PGSC0003DMT400047799	Potato	nucleus	37.23	51.09
Solyc11g070150.1.1	Tomato	nucleus	37.23	51.09
Bra001629.1-P	Field mustard	cytosol	36.17	50.0
VIT_04s0008g00210.t01	Wine grape	mitochondrion	45.21	45.95
OQU89026	Sorghum	cytosol	28.72	37.24
EES15189	Sorghum	cytosol, extracellular	27.13	35.42
KRH74260	Soybean	cytosol	27.13	32.9
VIT_11s0016g03170.t01	Wine grape	cytosol	30.32	26.64
PGSC0003DMT400094075	Potato	nucleus	27.66	25.62

Protein Annotations

Gene3D:1.20.120.160	MapMan:11.4.2.2	EntrezGene:8075559	UniProt:A0A1W0VZF5	GO:GO:0000160	GO:GO:0003674
GO:GO:0004871	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0007154	GO:GO:0007165
GO:GO:0008150	GO:GO:0009987	InterPro:HPT_dom_sf	InterPro:IPR008207	InterPro:IPR036641	EnsemblPlants:OQU87518
ProteinID:OQU87518	ProteinID:OQU87518.1	PFAM:PF01627	PFscan:PS50894	PANTHER:PTHR28242	PANTHER:PTHR28242:SF3
EnsemblPlantsGene:SORBI_3003G292600	SUPFAM:SSF47226	InterPro:Sig_transdc_His_kin_Hpt_dom	UniParc:UPI0009DC85BD	:	:

Description

hypothetical protein

Coordinates

chr3:+:62500932..62506587

Molecular Weight (calculated)

21419.5 Da

IEP (calculated)

6.506

GRAVY (calculated)

-0.483

Length

188 amino acids

Sequence
(BLAST)

001: MDRDNSTGMN IGTMPWDICE YLVTIRGRRL VLFNHLMSAN SIFDRVYSGN SLDAMKQGYL DEQFCQVEDL QDEASPNFAE EVVTLFFKDS ARLISNVEQA
101: LEKYPKDFNR WDAYMQQLKG SCSSIGASRM KSECMSFRDY CAQGNVEGCM RSFQKVKREH GALRQKLEAY FQLLRQAGPA GAATRPGM

Best Arabidopsis Sequence Match ( AT3G16360.2 )
(BLAST)

001: MQRQVALIKQ SLFDQGYLDE QFMELEELQD DANPNFVEEV SALYFKDSAR LINNIDQALE RGSFDFNRLD SYMHQFKGSS TSIGASKVKA ECTTFREYCR
101: AGNAEGCLRT FQQLKKEHST LRKKLEHYFQ LARQAGPKET ARRPK

Arabidopsis Description

AHP4AHP4 [Source:UniProtKB/TrEMBL;Acc:A0A178V965]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.