Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra027169.1-P | Field mustard | cytosol, nucleus, plastid | 100.0 | 100.0 |
| CDY30166 | Canola | cytosol | 95.16 | 88.72 |
| CDX75878 | Canola | cytosol | 87.9 | 81.95 |
| CDX82406 | Canola | cytosol | 87.1 | 81.2 |
| AT3G16360.2 | Thale cress | nucleus | 84.68 | 72.41 |
| KRH47212 | Soybean | cytosol, nucleus, plastid | 70.97 | 61.54 |
| KRH09934 | Soybean | nucleus | 68.55 | 56.67 |
| VIT_09s0002g03520.t01 | Wine grape | nucleus | 67.74 | 56.0 |
| KRH23400 | Soybean | nucleus | 67.74 | 56.0 |
| KRH44276 | Soybean | nucleus | 70.97 | 53.99 |
| GSMUA_Achr11P... | Banana | nucleus | 64.52 | 52.63 |
| Os01t0743800-00 | Rice | cytosol, nucleus, plastid | 61.29 | 50.33 |
| GSMUA_Achr10P... | Banana | nucleus | 60.48 | 49.67 |
| GSMUA_Achr9P16250_001 | Banana | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 58.87 | 49.66 |
| TraesCS1A01G341600.1 | Wheat | cytosol, mitochondrion, nucleus, plastid | 58.87 | 48.03 |
| TraesCS1B01G354300.1 | Wheat | cytosol, mitochondrion, nucleus, plastid | 58.87 | 48.03 |
| TraesCS1D01G343900.1 | Wheat | cytosol, mitochondrion, nucleus, plastid | 58.87 | 48.03 |
| OQU77568 | Sorghum | nucleus | 57.26 | 47.02 |
| HORVU3Hr1G070880.7 | Barley | cytosol | 57.26 | 46.71 |
| TraesCS3D01G275300.1 | Wheat | cytosol | 55.65 | 45.7 |
| TraesCS3B01G309100.1 | Wheat | cytosol | 55.65 | 45.7 |
| Os05t0186100-01 | Rice | nucleus | 55.65 | 45.7 |
| TraesCS1B01G141500.1 | Wheat | nucleus | 54.03 | 44.37 |
| EES19834 | Sorghum | cytosol, nucleus, plastid | 54.84 | 44.16 |
| Zm00001d043505_P001 | Maize | cytosol | 60.48 | 42.13 |
| Zm00001d037694_P001 | Maize | cytosol | 58.06 | 40.45 |
| OQU87518 | Sorghum | cytosol | 61.29 | 40.43 |
| CDY37282 | Canola | cytosol, nucleus, plastid | 47.58 | 38.31 |
| CDX85268 | Canola | cytosol | 47.58 | 37.82 |
| CDX86370 | Canola | cytosol | 47.58 | 37.82 |
| CDY19286 | Canola | cytosol | 46.77 | 37.66 |
| TraesCS3A01G275400.2 | Wheat | extracellular, mitochondrion | 54.84 | 37.57 |
| Zm00001d010791_P001 | Maize | mitochondrion | 51.61 | 37.43 |
| HORVU1Hr1G027980.32 | Barley | mitochondrion | 54.03 | 37.22 |
| CDY19992 | Canola | cytosol | 46.77 | 37.18 |
| CDY00096 | Canola | cytosol | 46.77 | 37.18 |
| CDX89890 | Canola | cytosol | 50.81 | 37.06 |
| CDX74472 | Canola | cytosol | 45.97 | 36.77 |
| CDY37867 | Canola | cytosol | 45.16 | 36.13 |
| TraesCS1D01G123300.1 | Wheat | nucleus | 44.35 | 34.16 |
| TraesCS1A01G122300.1 | Wheat | nucleus | 44.35 | 34.16 |
| HORVU1Hr1G075830.31 | Barley | cytosol, mitochondrion, plastid | 55.65 | 31.94 |
| CDY54309 | Canola | cytosol | 38.71 | 31.17 |
| CDY57687 | Canola | cytosol | 37.9 | 30.52 |
| PGSC0003DMT400094075 | Potato | nucleus | 44.35 | 27.09 |
| CDY71948 | Canola | cytosol | 4.03 | 17.24 |
Protein Annotations
| Gene3D:1.20.120.160 | MapMan:11.4.2.2 | GO:A0A078IWS3 | UniProt:A0A078IWS3 | EnsemblPlants:CDY56195 | ProteinID:CDY56195 |
| ProteinID:CDY56195.1 | GO:GO:0000160 | GO:GO:0003674 | GO:GO:0004871 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00017964001 |
| InterPro:HPT_dom_sf | InterPro:IPR008207 | InterPro:IPR036641 | PFAM:PF01627 | PFscan:PS50894 | PANTHER:PTHR28242 |
| PANTHER:PTHR28242:SF4 | SUPFAM:SSF47226 | InterPro:Sig_transdc_His_kin_Hpt_dom | UniParc:UPI000254782F | : | : |
Description
BnaA05g36880DBnaA05g36880D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IWS3]
Coordinates
chrLK033468:+:13595..14730
Molecular Weight (calculated)
14412.0 Da
IEP (calculated)
5.696
GRAVY (calculated)
-0.635
Length
124 amino acids
Sequence
(BLAST)
(BLAST)
001: MGKCMQGFLD EQFMELEELQ DDVNPNFVEE VATLYFKDSA RLINSIDQAL ERGSFDFNRL DNYMHQFKGS SSSIGASKVK TECTMFREYC RVGNAEGCLR
101: TFQQVKKEHA TLRKKLEHYF QASQ
101: TFQQVKKEHA TLRKKLEHYF QASQ
001: MTNIGKCMQG YLDEQFMELE ELQDDANPNF VEEVSALYFK DSARLINNID QALERGSFDF NRLDSYMHQF KGSSTSIGAS KVKAECTTFR EYCRAGNAEG
101: CLRTFQQLKK EHSTLRKKLE HYFQASQ
101: CLRTFQQLKK EHSTLRKKLE HYFQASQ
Arabidopsis Description
AHP4AHP4 [Source:UniProtKB/TrEMBL;Acc:A0A178V965]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.