CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1B01G141500.1	Wheat	nucleus	78.15	78.15
Os05t0186100-01	Rice	nucleus	77.48	77.48
Zm00001d037694_P001	Maize	cytosol	83.44	70.79
HORVU1Hr1G027980.32	Barley	mitochondrion	76.16	63.89
GSMUA_Achr11P...	Banana	nucleus	62.25	61.84
GSMUA_Achr10P...	Banana	nucleus	58.28	58.28
CDY56195	Canola	cytosol, nucleus, plastid	47.02	57.26
Bra027169.1-P	Field mustard	cytosol, nucleus, plastid	47.02	57.26
GSMUA_Achr9P16250_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	54.97	56.46
PGSC0003DMT400077451	Potato	cytosol, nucleus, plastid	50.33	55.88
Solyc11g070150.1.1	Tomato	nucleus	50.33	55.47
TraesCS1A01G122300.1	Wheat	nucleus	58.94	55.28
TraesCS1D01G123300.1	Wheat	nucleus	58.94	55.28
Solyc08g066350.1.1	Tomato	cytosol, mitochondrion, nucleus	49.67	55.15
PGSC0003DMT400047799	Potato	nucleus	49.67	54.74
KRH23400	Soybean	nucleus	54.3	54.67
KRH09934	Soybean	nucleus	54.3	54.67
KRH47212	Soybean	cytosol, nucleus, plastid	51.66	54.55
AT3G16360.2	Thale cress	nucleus	52.32	54.48
CDX75878	Canola	cytosol	47.68	54.14
CDX82406	Canola	cytosol	47.68	54.14
CDY30166	Canola	cytosol	47.02	53.38
VIT_09s0002g03520.t01	Wine grape	nucleus	52.32	52.67
EES19834	Sorghum	cytosol, nucleus, plastid	52.98	51.95
KRH52794	Soybean	cytosol, nucleus, plastid	45.7	48.25
KRH44276	Soybean	nucleus	50.99	47.24
Bra001629.1-P	Field mustard	cytosol	42.38	47.06
OQU87518	Sorghum	cytosol	54.97	44.15
VIT_04s0008g00210.t01	Wine grape	mitochondrion	52.32	42.7
EES15189	Sorghum	cytosol, extracellular	33.11	34.72
OQU89026	Sorghum	cytosol	30.46	31.72
KRH74260	Soybean	cytosol	30.46	29.68
VIT_11s0016g03170.t01	Wine grape	cytosol	37.09	26.17
PGSC0003DMT400094075	Potato	nucleus	32.45	24.14

Protein Annotations

Gene3D:1.20.120.160	MapMan:11.4.2.2	EntrezGene:8055697	UniProt:A0A1Z5R1A9	ncoils:Coil	GO:GO:0000160
GO:GO:0003674	GO:GO:0004871	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0007154
GO:GO:0007165	GO:GO:0008150	GO:GO:0009987	InterPro:HPT_dom_sf	InterPro:IPR008207	InterPro:IPR036641
EnsemblPlants:OQU77568	ProteinID:OQU77568	ProteinID:OQU77568.1	PFAM:PF01627	PFscan:PS50894	PANTHER:PTHR28242
PANTHER:PTHR28242:SF11	EnsemblPlantsGene:SORBI_3009G069500	SUPFAM:SSF47226	unigene:Sbi.10165	InterPro:Sig_transdc_His_kin_Hpt_dom	UniParc:UPI000B8B9636

Description

hypothetical protein

Coordinates

chr9:-:8016423..8017624

Molecular Weight (calculated)

17835.3 Da

IEP (calculated)

7.502

GRAVY (calculated)

-0.667

Length

151 amino acids

Sequence
(BLAST)

001: MPKCIIYIRY LSEDNWILHN GYLDEQFNQL EELQDDSSPN FVEEVVALFF KDSSRLLTNI EQALEKYPQD FYRLDSLVHQ FKGSGSSIGA LRMKNECSMF
101: KAHCNDRNLE GCRRSLQKMK REHATLKQKL ETYFHLLRQV GPPERAVNSW K

Best Arabidopsis Sequence Match ( AT3G16360.1 )
(BLAST)

001: MTNIGKCMQG YLDEQFMELE ELQDDANPNF VEEVSALYFK DSARLINNID QALERGSFDF NRLDSYMHQF KGSSTSIGAS KVKAECTTFR EYCRAGNAEG
101: CLRTFQQLKK EHSTLRKKLE HYFQASQ

Arabidopsis Description

AHP4AHP4 [Source:UniProtKB/TrEMBL;Acc:A0A178V965]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.