Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY56195 | Canola | cytosol, nucleus, plastid | 88.72 | 95.16 |
| CDX75878 | Canola | cytosol | 91.73 | 91.73 |
| CDX82406 | Canola | cytosol | 90.98 | 90.98 |
| AT3G16360.2 | Thale cress | nucleus | 88.72 | 81.38 |
| KRH47212 | Soybean | cytosol, nucleus, plastid | 72.18 | 67.13 |
| KRH09934 | Soybean | nucleus | 71.43 | 63.33 |
| KRH23400 | Soybean | nucleus | 70.68 | 62.67 |
| VIT_09s0002g03520.t01 | Wine grape | nucleus | 69.92 | 62.0 |
| KRH44276 | Soybean | nucleus | 72.93 | 59.51 |
| GSMUA_Achr11P... | Banana | nucleus | 66.17 | 57.89 |
| Os01t0743800-00 | Rice | cytosol, nucleus, plastid | 63.16 | 55.63 |
| GSMUA_Achr10P... | Banana | nucleus | 62.41 | 54.97 |
| TraesCS1D01G343900.1 | Wheat | cytosol, mitochondrion, nucleus, plastid | 60.9 | 53.29 |
| TraesCS1A01G341600.1 | Wheat | cytosol, mitochondrion, nucleus, plastid | 60.9 | 53.29 |
| TraesCS1B01G354300.1 | Wheat | cytosol, mitochondrion, nucleus, plastid | 60.9 | 53.29 |
| GSMUA_Achr9P16250_001 | Banana | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 57.14 | 51.7 |
| HORVU3Hr1G070880.7 | Barley | cytosol | 58.65 | 51.32 |
| TraesCS3D01G275300.1 | Wheat | cytosol | 57.14 | 50.33 |
| TraesCS3B01G309100.1 | Wheat | cytosol | 57.14 | 50.33 |
| Os05t0186100-01 | Rice | nucleus | 56.39 | 49.67 |
| EES19834 | Sorghum | cytosol, nucleus, plastid | 56.39 | 48.7 |
| TraesCS1B01G141500.1 | Wheat | nucleus | 54.89 | 48.34 |
| OQU77568 | Sorghum | nucleus | 53.38 | 47.02 |
| Zm00001d043505_P001 | Maize | cytosol | 61.65 | 46.07 |
| Zm00001d037694_P001 | Maize | cytosol | 59.4 | 44.38 |
| OQU87518 | Sorghum | cytosol | 57.89 | 40.96 |
| HORVU1Hr1G027980.32 | Barley | mitochondrion | 54.89 | 40.56 |
| Zm00001d010791_P001 | Maize | mitochondrion | 51.13 | 39.77 |
| CDY37282 | Canola | cytosol, nucleus, plastid | 45.86 | 39.61 |
| TraesCS1A01G122300.1 | Wheat | nucleus | 47.37 | 39.13 |
| TraesCS1D01G123300.1 | Wheat | nucleus | 47.37 | 39.13 |
| CDY19992 | Canola | cytosol | 45.86 | 39.1 |
| CDX85268 | Canola | cytosol | 45.86 | 39.1 |
| CDX86370 | Canola | cytosol | 45.86 | 39.1 |
| CDY00096 | Canola | cytosol | 45.86 | 39.1 |
| CDY19286 | Canola | cytosol | 45.11 | 38.96 |
| CDX74472 | Canola | cytosol | 45.11 | 38.71 |
| CDX89890 | Canola | cytosol | 48.87 | 38.24 |
| CDY37867 | Canola | cytosol | 44.36 | 38.06 |
| TraesCS3A01G275400.2 | Wheat | extracellular, mitochondrion | 51.13 | 37.57 |
| CDY54309 | Canola | cytosol | 39.1 | 33.77 |
| CDY57687 | Canola | cytosol | 38.35 | 33.12 |
| HORVU1Hr1G075830.31 | Barley | cytosol, mitochondrion, plastid | 51.13 | 31.48 |
| PGSC0003DMT400094075 | Potato | nucleus | 44.36 | 29.06 |
| CDY71948 | Canola | cytosol | 3.76 | 17.24 |
Protein Annotations
| Gene3D:1.20.120.160 | MapMan:11.4.2.2 | GO:A0A078GXD1 | UniProt:A0A078GXD1 | EnsemblPlants:CDY30166 | ProteinID:CDY30166 |
| ProteinID:CDY30166.1 | GO:GO:0000160 | GO:GO:0003674 | GO:GO:0004871 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00044748001 |
| InterPro:HPT_dom_sf | InterPro:IPR008207 | InterPro:IPR036641 | PFAM:PF01627 | PFscan:PS50894 | PANTHER:PTHR28242 |
| PANTHER:PTHR28242:SF4 | SUPFAM:SSF47226 | InterPro:Sig_transdc_His_kin_Hpt_dom | UniParc:UPI0004EE708A | : | : |
Description
BnaC05g36960DBnaC05g36960D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GXD1]
Coordinates
chrLK032249:+:457947..458969
Molecular Weight (calculated)
15511.3 Da
IEP (calculated)
5.248
GRAVY (calculated)
-0.592
Length
133 amino acids
Sequence
(BLAST)
(BLAST)
001: MQRQVALIKQ SLFDQGYLDE QFMELEELQD DVNPNFVEEV ATLYFKDSAR LINSIDQALE RGSFDFNRLD NYMHQFKGSS SSIGASKVKT ECTMFREYCR
101: VGNAEGCLMT FQQVKKEHAT LRKKLEHYFQ ASQ
101: VGNAEGCLMT FQQVKKEHAT LRKKLEHYFQ ASQ
001: MQRQVALIKQ SLFDQGYLDE QFMELEELQD DANPNFVEEV SALYFKDSAR LINNIDQALE RGSFDFNRLD SYMHQFKGSS TSIGASKVKA ECTTFREYCR
101: AGNAEGCLRT FQQLKKEHST LRKKLEHYFQ LARQAGPKET ARRPK
101: AGNAEGCLRT FQQLKKEHST LRKKLEHYFQ LARQAGPKET ARRPK
Arabidopsis Description
AHP4AHP4 [Source:UniProtKB/TrEMBL;Acc:A0A178V965]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.