Factsheet for GSMUA_Achr11P12350_001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr10P...	Banana	nucleus	76.32	76.82
GSMUA_Achr9P16250_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	73.68	76.19
Os05t0186100-01	Rice	nucleus	71.05	71.52
TraesCS1B01G141500.1	Wheat	nucleus	67.76	68.21
CDY30166	Canola	cytosol	57.89	66.17
VIT_09s0002g03520.t01	Wine grape	nucleus	64.47	65.33
CDX75878	Canola	cytosol	56.58	64.66
CDX82406	Canola	cytosol	56.58	64.66
Bra027169.1-P	Field mustard	cytosol, nucleus, plastid	52.63	64.52
CDY56195	Canola	cytosol, nucleus, plastid	52.63	64.52
AT3G16360.2	Thale cress	nucleus	60.53	63.45
OQU77568	Sorghum	nucleus	61.84	62.25
KRH47212	Soybean	cytosol, nucleus, plastid	58.55	62.24
PGSC0003DMT400077451	Potato	cytosol, nucleus, plastid	55.26	61.76
KRH09934	Soybean	nucleus	60.53	61.33
KRH23400	Soybean	nucleus	60.53	61.33
Solyc08g066350.1.1	Tomato	cytosol, mitochondrion, nucleus	53.95	60.29
Solyc11g070150.1.1	Tomato	nucleus	53.95	59.85
PGSC0003DMT400047799	Potato	nucleus	53.29	59.12
Zm00001d037694_P001	Maize	cytosol	67.76	57.87
HORVU1Hr1G027980.32	Barley	mitochondrion	68.42	57.78
KRH52794	Soybean	cytosol, nucleus, plastid	50.66	53.85
Bra001629.1-P	Field mustard	cytosol	48.03	53.68
KRH44276	Soybean	nucleus	56.58	52.76
TraesCS1A01G122300.1	Wheat	nucleus	53.29	50.31
TraesCS1D01G123300.1	Wheat	nucleus	53.29	50.31
VIT_04s0008g00210.t01	Wine grape	mitochondrion	60.53	49.73
GSMUA_Achr11P...	Banana	cytosol	44.74	45.03
GSMUA_Achr11P...	Banana	extracellular	39.47	40.27
GSMUA_Achr7P14570_001	Banana	cytosol	38.82	38.82
GSMUA_AchrUn_...	Banana	cytosol	38.16	38.16
GSMUA_Achr7P14620_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	38.16	38.16
GSMUA_Achr10P...	Banana	extracellular	36.84	37.58
GSMUA_Achr8P07680_001	Banana	extracellular	34.87	35.57
KRH74260	Soybean	cytosol	34.21	33.55
VIT_11s0016g03170.t01	Wine grape	cytosol	40.79	28.97
PGSC0003DMT400094075	Potato	nucleus	36.18	27.09

Protein Annotations

Gene3D:1.20.120.160	MapMan:11.4.2.2	GO:GO:0000160	GO:GO:0003674	GO:GO:0004871	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0009987
EnsemblPlantsGene:GSMUA_Achr11G12350_001	EnsemblPlants:GSMUA_Achr11P12350_001	EnsemblPlants:GSMUA_Achr11T12350_001	InterPro:HPT_dom_sf	InterPro:IPR008207	InterPro:IPR036641
UniProt:M0RRL5	PFAM:PF01627	PFscan:PS50894	PANTHER:PTHR28242	PANTHER:PTHR28242:SF11	SUPFAM:SSF47226
InterPro:Sig_transdc_His_kin_Hpt_dom	UniParc:UPI00029529A9	:	:	:	:

Description

Histidine-containing phosphotransfer protein 4 [Source:GMGC_GENE;Acc:GSMUA_Achr11G12350_001]

Coordinates

chr11:+:11349303..11352279

Molecular Weight (calculated)

17765.0 Da

IEP (calculated)

8.042

GRAVY (calculated)

-0.819

Length

152 amino acids

Sequence
(BLAST)

001: MEYASSLQRQ LASMKKNLFD QGYLDEQFYQ LEELQDESSP NFVEEVVTLF FRDSSRLVAN IDQALQKYPQ DFRRLDNFMH QLKGSASSIG AAKMKNECTS
101: FREFCNKENR EGCLRSFQKV KKEHAVLKQK LENYFQLLRQ DGPVDKATRS GN

Best Arabidopsis Sequence Match ( AT3G16360.2 )
(BLAST)

001: MQRQVALIKQ SLFDQGYLDE QFMELEELQD DANPNFVEEV SALYFKDSAR LINNIDQALE RGSFDFNRLD SYMHQFKGSS TSIGASKVKA ECTTFREYCR
101: AGNAEGCLRT FQQLKKEHST LRKKLEHYFQ LARQAGPKET ARRPK

Arabidopsis Description

AHP4AHP4 [Source:UniProtKB/TrEMBL;Acc:A0A178V965]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.