Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH47212 | Soybean | cytosol, nucleus, plastid | 82.82 | 94.41 |
| KRH09934 | Soybean | nucleus | 73.62 | 80.0 |
| KRH23400 | Soybean | nucleus | 70.55 | 76.67 |
| CDX75878 | Canola | cytosol | 61.35 | 75.19 |
| CDX82406 | Canola | cytosol | 61.35 | 75.19 |
| CDY30166 | Canola | cytosol | 59.51 | 72.93 |
| VIT_09s0002g03520.t01 | Wine grape | nucleus | 66.26 | 72.0 |
| Bra027169.1-P | Field mustard | cytosol, nucleus, plastid | 53.99 | 70.97 |
| CDY56195 | Canola | cytosol, nucleus, plastid | 53.99 | 70.97 |
| AT3G16360.2 | Thale cress | nucleus | 60.74 | 68.28 |
| Bra001629.1-P | Field mustard | cytosol | 53.37 | 63.97 |
| KRH52794 | Soybean | cytosol, nucleus, plastid | 55.21 | 62.94 |
| Os01t0743800-00 | Rice | cytosol, nucleus, plastid | 55.83 | 60.26 |
| GSMUA_Achr10P... | Banana | nucleus | 53.99 | 58.28 |
| GSMUA_Achr11P... | Banana | nucleus | 52.76 | 56.58 |
| TraesCS3D01G275300.1 | Wheat | cytosol | 51.53 | 55.63 |
| HORVU3Hr1G070880.7 | Barley | cytosol | 51.53 | 55.26 |
| TraesCS1B01G141500.1 | Wheat | nucleus | 50.92 | 54.97 |
| TraesCS3B01G309100.1 | Wheat | cytosol | 50.92 | 54.97 |
| Os05t0186100-01 | Rice | nucleus | 49.08 | 52.98 |
| TraesCS1A01G341600.1 | Wheat | cytosol, mitochondrion, nucleus, plastid | 49.08 | 52.63 |
| TraesCS1B01G354300.1 | Wheat | cytosol, mitochondrion, nucleus, plastid | 49.08 | 52.63 |
| TraesCS1D01G343900.1 | Wheat | cytosol, mitochondrion, nucleus, plastid | 49.08 | 52.63 |
| GSMUA_Achr9P16250_001 | Banana | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 47.24 | 52.38 |
| OQU77568 | Sorghum | nucleus | 47.24 | 50.99 |
| EES19834 | Sorghum | cytosol, nucleus, plastid | 47.85 | 50.65 |
| Zm00001d043505_P001 | Maize | cytosol | 54.6 | 50.0 |
| Zm00001d037694_P001 | Maize | cytosol | 53.37 | 48.88 |
| HORVU1Hr1G027980.32 | Barley | mitochondrion | 50.92 | 46.11 |
| OQU87518 | Sorghum | cytosol | 52.15 | 45.21 |
| TraesCS1D01G123300.1 | Wheat | nucleus | 43.56 | 44.1 |
| TraesCS1A01G122300.1 | Wheat | nucleus | 43.56 | 44.1 |
| KRH33995 | Soybean | cytosol | 39.26 | 43.84 |
| Zm00001d010791_P001 | Maize | mitochondrion | 44.79 | 42.69 |
| KRH20965 | Soybean | cytosol | 40.49 | 42.58 |
| KRH11296 | Soybean | cytosol | 40.49 | 42.58 |
| KRG95451 | Soybean | cytosol | 33.74 | 41.98 |
| KRH67127 | Soybean | cytosol | 22.09 | 40.91 |
| KRH68619 | Soybean | cytosol, nucleus, plastid | 37.42 | 40.67 |
| TraesCS3A01G275400.2 | Wheat | extracellular, mitochondrion | 44.79 | 40.33 |
| KRH71497 | Soybean | cytosol, mitochondrion, nucleus | 37.42 | 40.13 |
| KRH31957 | Soybean | cytosol | 37.42 | 40.13 |
| KRG96886 | Soybean | cytosol, nucleus, plastid | 36.2 | 38.82 |
| KRH50948 | Soybean | cytosol | 36.2 | 38.06 |
| KRH74260 | Soybean | cytosol | 34.36 | 36.13 |
| KRH09720 | Soybean | extracellular | 33.74 | 35.71 |
| KRG92807 | Soybean | cytosol | 39.88 | 35.52 |
| KRH47442 | Soybean | extracellular | 33.13 | 34.62 |
| KRH44466 | Soybean | extracellular | 33.13 | 34.62 |
| HORVU1Hr1G075830.31 | Barley | cytosol, mitochondrion, plastid | 42.33 | 31.94 |
| PGSC0003DMT400094075 | Potato | nucleus | 36.2 | 29.06 |
| KRH30489 | Soybean | cytosol | 21.47 | 23.18 |
Protein Annotations
| Gene3D:1.20.120.160 | EntrezGene:100798055 | MapMan:11.4.2.2 | UniProt:A0A0R0IX96 | EMBL:ACUP02004925 | ncoils:Coil |
| EnsemblPlantsGene:GLYMA_08G201100 | GO:GO:0000160 | GO:GO:0003674 | GO:GO:0004871 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 | GO:GO:0009987 | InterPro:HPT_dom_sf |
| InterPro:IPR008207 | InterPro:IPR036641 | EnsemblPlants:KRH44276 | ProteinID:KRH44276 | ProteinID:KRH44276.1 | PFAM:PF01627 |
| PFscan:PS50894 | PANTHER:PTHR28242 | PANTHER:PTHR28242:SF4 | SUPFAM:SSF47226 | InterPro:Sig_transdc_His_kin_Hpt_dom | UniParc:UPI0003DE9640 |
Description
hypothetical protein
Coordinates
chr8:-:16265213..16267402
Molecular Weight (calculated)
18968.8 Da
IEP (calculated)
8.315
GRAVY (calculated)
-0.671
Length
163 amino acids
Sequence
(BLAST)
(BLAST)
001: MDRNQSRRQV AAMKQSLFDQ GLLDEQFIQL EELQDDANPN FVEEIVTLHY RDSSRLISSI EQALKERNPL DFNKLDTLMH QFKGSSSSIG AKKVKTECNL
101: FREYCRAGNA EGCMRSFQQL KREYAALRKK LEAYFQLGKL DPRKQHVAPN EDLMKICIIG QMY
101: FREYCRAGNA EGCMRSFQQL KREYAALRKK LEAYFQLGKL DPRKQHVAPN EDLMKICIIG QMY
001: MTNIGKCMQG YLDEQFMELE ELQDDANPNF VEEVSALYFK DSARLINNID QALERGSFDF NRLDSYMHQF KGSSTSIGAS KVKAECTTFR EYCRAGNAEG
101: CLRTFQQLKK EHSTLRKKLE HYFQASQ
101: CLRTFQQLKK EHSTLRKKLE HYFQASQ
Arabidopsis Description
AHP4AHP4 [Source:UniProtKB/TrEMBL;Acc:A0A178V965]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.