CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 5
golgi 4
plasma membrane 4
endoplasmic reticulum 4
vacuole 4
nucleus 1
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	secretory
MultiLoc:	extracellular
Plant-mPloc:	nucleus
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH44466	Soybean	extracellular	92.86	91.67
KRH47442	Soybean	extracellular	92.21	91.03
VIT_09s0002g06960.t01	Wine grape	cytosol	87.66	86.54
Solyc03g116720.1.1	Tomato	cytosol	59.74	80.0
PGSC0003DMT400001706	Potato	cytosol	74.68	74.19
Bra003551.1-P	Field mustard	cytosol	72.08	72.08
CDY57687	Canola	cytosol	72.08	72.08
CDY54309	Canola	cytosol	71.43	71.43
AT1G80100.3	Thale cress	cytosol, extracellular, nucleus	69.48	66.88
KRH31957	Soybean	cytosol	44.81	45.39
KRH71497	Soybean	cytosol, mitochondrion, nucleus	44.81	45.39
KRH33995	Soybean	cytosol	42.86	45.21
KRH20965	Soybean	cytosol	44.16	43.87
KRH11296	Soybean	cytosol	43.51	43.23
KRH68619	Soybean	cytosol, nucleus, plastid	41.56	42.67
KRH50948	Soybean	cytosol	42.86	42.58
KRG96886	Soybean	cytosol, nucleus, plastid	41.56	42.11
KRG95451	Soybean	cytosol	35.06	41.22
KRH67127	Soybean	cytosol	23.38	40.91
KRH47212	Soybean	cytosol, nucleus, plastid	37.01	39.86
KRH23400	Soybean	nucleus	37.66	38.67
KRH09934	Soybean	nucleus	37.01	38.0
KRG92807	Soybean	cytosol	42.86	36.07
KRH52794	Soybean	cytosol, nucleus, plastid	33.12	35.66
KRH44276	Soybean	nucleus	35.71	33.74
KRH30489	Soybean	cytosol	23.38	23.84
KRH74260	Soybean	cytosol	23.38	23.23

Protein Annotations

Gene3D:1.20.120.160	EntrezGene:100814937	MapMan:11.4.2.2	EMBL:ACUP02009107	EnsemblPlantsGene:GLYMA_15G007400	GO:GO:0000160
GO:GO:0003674	GO:GO:0003824	GO:GO:0004871	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005737	GO:GO:0006464	GO:GO:0006468
GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008152	GO:GO:0009719	GO:GO:0009736
GO:GO:0009927	GO:GO:0009987	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	GO:GO:0019538
GO:GO:0043424	InterPro:HPT_dom_sf	UniProt:I1MCF1	InterPro:IPR008207	InterPro:IPR036641	EnsemblPlants:KRH09720
ProteinID:KRH09720	ProteinID:KRH09720.1	PFAM:PF01627	PFscan:PS50894	PANTHER:PTHR28242	PANTHER:PTHR28242:SF1
SUPFAM:SSF47226	InterPro:Sig_transdc_His_kin_Hpt_dom	UniParc:UPI000233ABB9	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr15:+:615315..617043

Molecular Weight (calculated)

17699.4 Da

IEP (calculated)

6.670

GRAVY (calculated)

-0.184

Length

154 amino acids

Sequence
(BLAST)

001: MLGFGADLLW ADMNRLLAFL FHQGVLDEQF LQLQQLQDEA SPNFVSEVVN IYFHESEKLL TNLRGLLMER EYKKMGIHLN QFMGSSSSIG AKRVTNVCAA
101: FRAATDQSNR AGCLRALEML EHEYCYLKNK LHELFQIEQQ RALVAGVRYP VQNQ

Best Arabidopsis Sequence Match ( AT1G80100.1 )
(BLAST)

001: MLGLGVDRLQ ADINRLLASL FHQGVLDEQF LQLQQLQDET SPNFVYDVIN IYFDESEKLL RNLRLLLMDR EFSDYKKIGL HLNQLVGSSS SIGARRVRNV
101: CVAFRSASEL SNRPGCLRGL EVVEHEYHYL KNMMHELFQL EQQRILAAGV RYPM

Arabidopsis Description

AHP6histidine phosphotransfer protein 6 [Source:TAIR;Acc:AT1G80100]
SUBAcon: [extracellular,cytosol,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.