Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY57687 | Canola | cytosol | 98.7 | 98.7 |
| AT1G80100.3 | Thale cress | cytosol, extracellular, nucleus | 88.31 | 85.0 |
| VIT_09s0002g06960.t01 | Wine grape | cytosol | 81.82 | 80.77 |
| Solyc03g116720.1.1 | Tomato | cytosol | 59.74 | 80.0 |
| KRH47442 | Soybean | extracellular | 78.57 | 77.56 |
| KRH44466 | Soybean | extracellular | 77.92 | 76.92 |
| PGSC0003DMT400001706 | Potato | cytosol | 72.73 | 72.26 |
| KRH09720 | Soybean | extracellular | 71.43 | 71.43 |
| CDY19286 | Canola | cytosol | 46.75 | 46.75 |
| CDY37282 | Canola | cytosol, nucleus, plastid | 46.1 | 46.1 |
| CDX74472 | Canola | cytosol | 41.56 | 41.29 |
| CDY37867 | Canola | cytosol | 40.91 | 40.65 |
| CDY30166 | Canola | cytosol | 33.77 | 39.1 |
| CDX89890 | Canola | cytosol | 42.86 | 38.82 |
| CDY56195 | Canola | cytosol, nucleus, plastid | 31.17 | 38.71 |
| CDY00096 | Canola | cytosol | 38.96 | 38.46 |
| CDX86370 | Canola | cytosol | 38.96 | 38.46 |
| CDX85268 | Canola | cytosol | 38.96 | 38.46 |
| CDY71948 | Canola | cytosol | 7.14 | 37.93 |
| CDY19992 | Canola | cytosol | 38.31 | 37.82 |
| CDX82406 | Canola | cytosol | 32.47 | 37.59 |
| CDX75878 | Canola | cytosol | 32.47 | 37.59 |
Protein Annotations
| Gene3D:1.20.120.160 | MapMan:11.4.2.2 | GO:A0A078IY88 | UniProt:A0A078IY88 | EnsemblPlants:CDY54309 | ProteinID:CDY54309 |
| ProteinID:CDY54309.1 | GO:GO:0000160 | GO:GO:0003674 | GO:GO:0004871 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00013796001 |
| InterPro:HPT_dom_sf | InterPro:IPR008207 | InterPro:IPR036641 | PFAM:PF01627 | PFscan:PS50894 | PANTHER:PTHR28242 |
| PANTHER:PTHR28242:SF1 | SUPFAM:SSF47226 | InterPro:Sig_transdc_His_kin_Hpt_dom | UniParc:UPI0004EE8BB8 | SEG:seg | : |
Description
BnaC06g43070DBnaC06g43070D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IY88]
Coordinates
chrLK033301:+:13250..14563
Molecular Weight (calculated)
17859.7 Da
IEP (calculated)
6.676
GRAVY (calculated)
-0.180
Length
154 amino acids
Sequence
(BLAST)
(BLAST)
001: MLGLGVDRLQ ADINRLLTSL FHQGVLDEQF LQLQQLQDET SPTFVYDVIN IYFDESEKLL RSLRLLLMDR EFSDYKKIGL HLNQLVGSSS SIGARRVRTV
101: CVAFRSASEL NNRPGCLRGL EVVEHEYHYL KNMMHELFQL EQQRLLAAGV RYPM
101: CVAFRSASEL NNRPGCLRGL EVVEHEYHYL KNMMHELFQL EQQRLLAAGV RYPM
001: MLGLGVDRLQ ADINRLLASL FHQGVLDEQF LQLQQLQDET SPNFVYDVIN IYFDESEKLL RNLRLLLMDR EFSDYKKIGL HLNQLVGSSS SIGARRVRNV
101: CVAFRSASEL SNRPGCLRGL EVVEHEYHYL KNMMHELFQL EQQRILAAGV RYPM
101: CVAFRSASEL SNRPGCLRGL EVVEHEYHYL KNMMHELFQL EQQRILAAGV RYPM
Arabidopsis Description
AHP6histidine phosphotransfer protein 6 [Source:TAIR;Acc:AT1G80100]
SUBAcon: [extracellular,nucleus,cytosol]
SUBAcon: [extracellular,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.