Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- extracellular 2
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- nucleus 1
- mitochondrion 2
- cytosol 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc03g116720.1.1 | Tomato | cytosol | 72.9 | 98.26 |
| VIT_09s0002g06960.t01 | Wine grape | cytosol | 83.87 | 83.33 |
| KRH44466 | Soybean | extracellular | 80.0 | 79.49 |
| KRH47442 | Soybean | extracellular | 80.0 | 79.49 |
| KRH09720 | Soybean | extracellular | 74.19 | 74.68 |
| Bra003551.1-P | Field mustard | cytosol | 72.9 | 73.38 |
| CDY57687 | Canola | cytosol | 72.9 | 73.38 |
| CDY54309 | Canola | cytosol | 72.26 | 72.73 |
| AT1G80100.3 | Thale cress | cytosol, extracellular, nucleus | 72.9 | 70.62 |
| PGSC0003DMT400081747 | Potato | cytosol, nucleus, plastid | 43.87 | 45.03 |
| PGSC0003DMT400051833 | Potato | cytosol | 41.94 | 42.76 |
| PGSC0003DMT400073603 | Potato | cytosol | 40.65 | 42.57 |
| PGSC0003DMT400077451 | Potato | cytosol, nucleus, plastid | 36.13 | 41.18 |
| PGSC0003DMT400047799 | Potato | nucleus | 32.9 | 37.23 |
| PGSC0003DMT400094075 | Potato | nucleus | 25.16 | 19.21 |
Protein Annotations
| Gene3D:1.20.120.160 | MapMan:11.4.2.2 | GO:GO:0000160 | GO:GO:0003674 | GO:GO:0004871 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 | GO:GO:0009987 |
| InterPro:HPT_dom_sf | InterPro:IPR008207 | InterPro:IPR036641 | UniProt:M0ZIY7 | PFAM:PF01627 | EnsemblPlantsGene:PGSC0003DMG400000638 |
| PGSC:PGSC0003DMG400000638 | EnsemblPlants:PGSC0003DMT400001706 | PANTHER:PTHR28242 | PANTHER:PTHR28242:SF1 | SUPFAM:SSF47226 | InterPro:Sig_transdc_His_kin_Hpt_dom |
| UniParc:UPI0002958862 | SEG:seg | : | : | : | : |
Description
Histidine-containing phosphotransfer protein [Source:PGSC_GENE;Acc:PGSC0003DMG400000638]
Coordinates
chr3:-:56493561..56494955
Molecular Weight (calculated)
18075.8 Da
IEP (calculated)
6.510
GRAVY (calculated)
-0.326
Length
155 amino acids
Sequence
(BLAST)
(BLAST)
001: MLGLGVERLR GDMNRLLALL FHQGVLDEQF LQLQQLQDES SPNFVSEVVN IYFQESEKLL RNLRSLLMDR EFSDYKKMGV HLNQFIGSSS SIGAKRVRNV
101: CVAFRVASEQ NNRLGCLRAL ELLEHEYCYL KNKLHELFQG RDQWEVANEC FGKFE
101: CVAFRVASEQ NNRLGCLRAL ELLEHEYCYL KNKLHELFQG RDQWEVANEC FGKFE
001: MLGLGVDRLQ ADINRLLASL FHQGVLDEQF LQLQQLQDET SPNFVYDVIN IYFDESEKLL RNLRLLLMDR EFSDYKKIGL HLNQLVGSSS SIGARRVRNV
101: CVAFRSASEL SNRPGCLRGL EVVEHEYHYL KNMMHELFQL EQQRILAAGV RYPM
101: CVAFRSASEL SNRPGCLRGL EVVEHEYHYL KNMMHELFQL EQQRILAAGV RYPM
Arabidopsis Description
AHP6histidine phosphotransfer protein 6 [Source:TAIR;Acc:AT1G80100]
SUBAcon: [extracellular,nucleus,cytosol]
SUBAcon: [extracellular,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.