CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 5
endoplasmic reticulum 4
vacuole 4
plasma membrane 4
golgi 4
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	cytosol, secretory
BaCelLo:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH47442	Soybean	extracellular	99.36	99.36
KRH09720	Soybean	extracellular	91.67	92.86
VIT_09s0002g06960.t01	Wine grape	cytosol	92.31	92.31
Solyc03g116720.1.1	Tomato	cytosol	63.46	86.09
PGSC0003DMT400001706	Potato	cytosol	79.49	80.0
Bra003551.1-P	Field mustard	cytosol	77.56	78.57
CDY57687	Canola	cytosol	77.56	78.57
CDY54309	Canola	cytosol	76.92	77.92
AT1G80100.3	Thale cress	cytosol, extracellular, nucleus	73.08	71.25
KRH33995	Soybean	cytosol	44.23	47.26
KRH31957	Soybean	cytosol	45.51	46.71
KRH71497	Soybean	cytosol, mitochondrion, nucleus	45.51	46.71
KRH20965	Soybean	cytosol	45.51	45.81
KRH11296	Soybean	cytosol	44.87	45.16
KRH68619	Soybean	cytosol, nucleus, plastid	42.95	44.67
KRH50948	Soybean	cytosol	44.23	44.52
KRG96886	Soybean	cytosol, nucleus, plastid	42.95	44.08
KRG95451	Soybean	cytosol	36.54	43.51
KRH67127	Soybean	cytosol	23.72	42.05
KRH47212	Soybean	cytosol, nucleus, plastid	35.9	39.16
KRH23400	Soybean	nucleus	36.54	38.0
KRH09934	Soybean	nucleus	36.54	38.0
KRG92807	Soybean	cytosol	44.23	37.7
KRH52794	Soybean	cytosol, nucleus, plastid	32.69	35.66
KRH44276	Soybean	nucleus	34.62	33.13
KRH74260	Soybean	cytosol	25.0	25.16
KRH30489	Soybean	cytosol	23.72	24.5

Protein Annotations

Gene3D:1.20.120.160	EntrezGene:100789608	MapMan:11.4.2.2	UniProt:A0A0R0ITP2	EMBL:ACUP02004928	EnsemblPlantsGene:GLYMA_08G212800
GO:GO:0000160	GO:GO:0003674	GO:GO:0003824	GO:GO:0004871	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005737	GO:GO:0007154
GO:GO:0007165	GO:GO:0008150	GO:GO:0008152	GO:GO:0009719	GO:GO:0009736	GO:GO:0009927
GO:GO:0009987	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	GO:GO:0043424	InterPro:HPT_dom_sf
InterPro:IPR008207	InterPro:IPR036641	EnsemblPlants:KRH44466	ProteinID:KRH44466	ProteinID:KRH44466.1	PFAM:PF01627
PFscan:PS50894	PANTHER:PTHR28242	PANTHER:PTHR28242:SF1	SUPFAM:SSF47226	InterPro:Sig_transdc_His_kin_Hpt_dom	UniParc:UPI0002338F7F
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr8:-:17167369..17169706

Molecular Weight (calculated)

18053.9 Da

IEP (calculated)

7.042

GRAVY (calculated)

-0.227

Length

156 amino acids

Sequence
(BLAST)

001: MLGLGADLLW ADMNRLLAFL FHQGVLDEQF LQLQQLQDET SPNFVSEVVN IYFHESEKLL RNLRALLMEK EFSDYKKMGI HLNQFMGSSS SIGAKRVRNV
101: CVAFRAATEQ NNRAGCLRAL EMLEHEYCYL KNKLHELFQI EQQRALAAGV RYPVQN

Best Arabidopsis Sequence Match ( AT1G80100.1 )
(BLAST)

001: MLGLGVDRLQ ADINRLLASL FHQGVLDEQF LQLQQLQDET SPNFVYDVIN IYFDESEKLL RNLRLLLMDR EFSDYKKIGL HLNQLVGSSS SIGARRVRNV
101: CVAFRSASEL SNRPGCLRGL EVVEHEYHYL KNMMHELFQL EQQRILAAGV RYPM

Arabidopsis Description

AHP6histidine phosphotransfer protein 6 [Source:TAIR;Acc:AT1G80100]
SUBAcon: [extracellular,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.