CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus, cytosol

Predictor Summary:

nucleus 4
cytosol 1
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG96886	Soybean	cytosol, nucleus, plastid	94.0	92.76
KRH33995	Soybean	cytosol	78.0	80.14
Solyc01g098400.2.1	Tomato	cytosol, nucleus, plastid	70.0	70.95
VIT_14s0030g00410.t01	Wine grape	cytosol	70.67	70.67
PGSC0003DMT400073603	Potato	cytosol	68.67	69.59
GSMUA_Achr11P...	Banana	cytosol	65.33	64.9
KRG92807	Soybean	cytosol	78.67	64.48
KRH11296	Soybean	cytosol	66.0	63.87
KRH20965	Soybean	cytosol	66.0	63.87
KRH50948	Soybean	cytosol	66.0	63.87
KRH67127	Soybean	cytosol	34.67	59.09
KRG95451	Soybean	cytosol	48.67	55.73
GSMUA_Achr7P14570_001	Banana	cytosol	54.0	53.29
GSMUA_AchrUn_...	Banana	cytosol	54.0	53.29
KRH31957	Soybean	cytosol	53.33	52.63
KRH71497	Soybean	cytosol, mitochondrion, nucleus	53.33	52.63
GSMUA_Achr7P14620_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	53.33	52.63
KRH47212	Soybean	cytosol, nucleus, plastid	42.67	44.76
KRH44466	Soybean	extracellular	44.67	42.95
KRH47442	Soybean	extracellular	44.67	42.95
KRH52794	Soybean	cytosol, nucleus, plastid	40.67	42.66
KRH09720	Soybean	extracellular	42.67	41.56
KRH09934	Soybean	nucleus	41.33	41.33
KRH23400	Soybean	nucleus	40.67	40.67
KRH44276	Soybean	nucleus	40.67	37.42
KRH74260	Soybean	cytosol	31.33	30.32
KRH30489	Soybean	cytosol	28.67	28.48

Protein Annotations

Gene3D:1.20.120.160	EntrezGene:100787544	MapMan:11.4.2.2	EMBL:ACUP02002121	EnsemblPlantsGene:GLYMA_03G241700	GO:GO:0000160
GO:GO:0003674	GO:GO:0003824	GO:GO:0004871	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005737	GO:GO:0006464	GO:GO:0006468
GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008152	GO:GO:0009719	GO:GO:0009736
GO:GO:0009927	GO:GO:0009987	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	GO:GO:0019538
GO:GO:0043424	InterPro:HPT_dom_sf	InterPro:IPR008207	InterPro:IPR036641	UniProt:K7KGR6	EnsemblPlants:KRH68619
ProteinID:KRH68619	ProteinID:KRH68619.1	PFAM:PF01627	PFscan:PS50894	PANTHER:PTHR28242	PANTHER:PTHR28242:SF24
SUPFAM:SSF47226	InterPro:Sig_transdc_His_kin_Hpt_dom	UniParc:UPI00023377B3	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr3:+:43993148..43996093

Molecular Weight (calculated)

17156.4 Da

IEP (calculated)

4.720

GRAVY (calculated)

-0.390

Length

150 amino acids

Sequence
(BLAST)

001: MYGVSQLQRQ LAQYTSSLFE EGFLDDQFNQ LQQLQDESNP EFVVEVVTLF FEDAERLLNE LAKALGQENI DFKRVEAHVR QLKGSSSSIG AQRVQKVCIA
101: FRNYCEEKNV EGCLKSLQEI KQECSLVKSK FETLFKMEQQ LFAAGGSVTR

Best Arabidopsis Sequence Match ( AT1G03430.1 )
(BLAST)

001: MNTIVVAQLQ RQFQDYIVSL YQQGFLDNQF SELRKLQDEG TPDFVAEVVS LFFDDCSKLI NTMSISLERP DNVDFKQVDS GVHQLKGSSS SVGARRVKNV
101: CISFKECCDV QNREGCLRCL QQVDYEYKML KTKLQDLFNL EKQILQAGGT IPQVDIN

Arabidopsis Description

AHP5histidine-containing phosphotransfer factor 5 [Source:TAIR;Acc:AT1G03430]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.