Factsheet for VIT_14s0030g00410.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH33995	Soybean	cytosol	76.0	78.08
VIT_05s0020g02210.t01	Wine grape	cytosol	75.33	74.34
Solyc01g098400.2.1	Tomato	cytosol, nucleus, plastid	71.33	72.3
PGSC0003DMT400073603	Potato	cytosol	70.67	71.62
VIT_07s0104g00880.t01	Wine grape	cytosol, nucleus, plastid	71.33	70.86
KRH68619	Soybean	cytosol, nucleus, plastid	70.67	70.67
GSMUA_Achr11P...	Banana	cytosol	70.0	69.54
KRG96886	Soybean	cytosol, nucleus, plastid	70.0	69.08
KRG92807	Soybean	cytosol	74.67	61.2
GSMUA_Achr7P14570_001	Banana	cytosol	59.33	58.55
GSMUA_AchrUn_...	Banana	cytosol	56.67	55.92
GSMUA_Achr7P14620_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	56.0	55.26
VIT_09s0002g06960.t01	Wine grape	cytosol	50.67	48.72
VIT_09s0002g03520.t01	Wine grape	nucleus	45.33	45.33
VIT_04s0008g00210.t01	Wine grape	mitochondrion	44.67	36.22
VIT_13s0074g00740.t01	Wine grape	cytosol	28.67	29.25
VIT_11s0016g03170.t01	Wine grape	cytosol	38.0	26.64

Protein Annotations

Gene3D:1.20.120.160	EntrezGene:100250410	wikigene:100250410	MapMan:11.4.2.2	ProteinID:CBI34323	ProteinID:CBI34323.3
ncoils:Coil	UniProt:D7TUZ8	EMBL:FN596249	GO:GO:0000160	GO:GO:0003674	GO:GO:0003824
GO:GO:0004871	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0005737	GO:GO:0006464	GO:GO:0006468	GO:GO:0007154	GO:GO:0007165
GO:GO:0008150	GO:GO:0008152	GO:GO:0009719	GO:GO:0009736	GO:GO:0009927	GO:GO:0009987
GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	GO:GO:0019538	GO:GO:0043424	InterPro:HPT_dom_sf
InterPro:IPR008207	InterPro:IPR036641	EntrezGene:LOC100250410	wikigene:LOC100250410	PFAM:PF01627	PFscan:PS50894
PANTHER:PTHR28242	PANTHER:PTHR28242:SF24	SUPFAM:SSF47226	InterPro:Sig_transdc_His_kin_Hpt_dom	TIGR:TC62606	UniParc:UPI00015CCB39
ArrayExpress:VIT_14s0030g00410	EnsemblPlantsGene:VIT_14s0030g00410	EnsemblPlants:VIT_14s0030g00410.t01	unigene:Vvi.2286	RefSeq:XP_002265307	RefSeq:XP_002265307.1

Description

No Description!

Coordinates

chr14:+:4253335..4255433

Molecular Weight (calculated)

17077.2 Da

IEP (calculated)

4.288

GRAVY (calculated)

-0.298

Length

150 amino acids

Sequence
(BLAST)

001: MDGVVQLQRQ LLDYTTQLFQ EGFLNDQFTQ LQQLQDETNP DFVVEVVSLF FEDSERLLNE LANTLDQQSI DFRKVDSHVH QLKGSSSSIG AQRVQNVCIA
101: FRNFCDAQNT EGCLKCLQQV KNEYALVKNK LETLFQLEQQ ILAAGGSIPM

Best Arabidopsis Sequence Match ( AT3G21510.1 )
(BLAST)

001: MDLVQKQKSL QDYTKSLFLE GILDSQFLQL QQLQDESNPD FVSQVVTLFF QDSDRILNDL SLSLDQQVVD FKKVDPHVHQ LKGSSSSIGA QRVKNACVVF
101: RSFCEQQNVE ACHRCLQQVK QEYYLVKNRL ETLFKLEQQI VASGGMIPAV ELGF

Arabidopsis Description

AHP1AHP1 [Source:UniProtKB/TrEMBL;Acc:A0A178V856]
SUBAcon: [cytosol,nucleus,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.