Factsheet for VIT_13s0074g00740.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr11P...	Banana	extracellular	42.18	41.61
GSMUA_Achr10P...	Banana	extracellular	40.82	40.27
GSMUA_Achr8P07680_001	Banana	extracellular	40.82	40.27
HORVU4Hr1G001660.1	Barley	cytosol	35.37	36.11
Zm00001d005344_P002	Maize	cytosol	34.69	35.17
OQU89026	Sorghum	cytosol	34.69	35.17
TraesCS4D01G009800.1	Wheat	cytosol	31.97	34.31
TraesCS4D01G010000.1	Wheat	cytosol	33.33	34.27
TraesCSU01G060000.1	Wheat	cytosol	33.33	34.27
TraesCSU01G060100.1	Wheat	cytosol	33.33	34.27
TraesCSU01G060200.3	Wheat	cytosol	33.33	34.27
TraesCS4B01G011700.1	Wheat	cytosol	31.97	32.87
TraesCS1B01G061500.1	Wheat	cytosol	31.97	32.87
TraesCS4A01G303500.1	Wheat	cytosol	32.65	32.65
TraesCS4D01G009000.1	Wheat	cytosol	32.65	32.43
TraesCSU01G059900.1	Wheat	cytosol	31.29	32.17
HORVU4Hr1G001650.1	Barley	extracellular	31.29	32.17
TraesCS4D01G009900.1	Wheat	cytosol	31.29	32.17
TraesCS4D01G279500.1	Wheat	plastid	31.97	31.97
TraesCS4B01G010300.1	Wheat	extracellular	31.97	31.97
HORVU4Hr1G001590.1	Barley	plastid	31.29	31.08
Os09t0567400-01	Rice	cytosol	31.29	30.87
VIT_09s0002g06960.t01	Wine grape	cytosol	32.65	30.77
Os08t0557700-01	Rice	cytosol, plastid	30.61	30.61
TraesCS4A01G022400.1	Wheat	plastid	30.61	30.61
TraesCS4B01G281000.1	Wheat	plastid	29.93	29.93
TraesCSU01G060300.1	Wheat	cytosol	29.93	29.73
VIT_05s0020g02210.t01	Wine grape	cytosol	30.61	29.61
HORVU4Hr1G001670.1	Barley	cytosol	21.77	29.36
VIT_07s0104g00880.t01	Wine grape	cytosol, nucleus, plastid	29.93	29.14
TraesCS4D01G009700.1	Wheat	cytosol	29.93	29.14
TraesCS1B01G061400.1	Wheat	cytosol	29.93	29.14
VIT_14s0030g00410.t01	Wine grape	cytosol	29.25	28.67
EES15189	Sorghum	cytosol, extracellular	27.89	28.47
TraesCS4D01G008700.1	Wheat	cytosol	28.57	28.38
TraesCS4A01G480800.1	Wheat	cytosol, extracellular	25.17	28.24
TraesCS7A01G016100.1	Wheat	cytosol, extracellular	25.17	28.24
Zm00001d031961_P002	Maize	cytosol, extracellular	27.89	27.89
TraesCSU01G197100.1	Wheat	cytosol	28.57	27.81
TraesCSU01G059800.1	Wheat	cytosol	28.57	27.81
TraesCS7D01G012700.1	Wheat	cytosol, extracellular	24.49	27.48
TraesCSU01G214800.1	Wheat	cytosol	30.61	27.44
TraesCS4A01G302200.1	Wheat	cytosol	27.89	27.15
HORVU4Hr1G074350.1	Barley	cytosol, mitochondrion	17.69	26.8
TraesCS4A01G480600.1	Wheat	cytosol, extracellular	25.85	26.76
TraesCS6D01G021500.2	Wheat	cytosol, extracellular	25.85	26.57
TraesCS6A01G020400.1	Wheat	extracellular	25.85	26.39
TraesCS4A01G479600.1	Wheat	cytosol	23.13	25.95
TraesCS6D01G023100.1	Wheat	cytosol, extracellular	23.13	25.76
TraesCS4A01G480700.2	Wheat	cytosol, extracellular	23.81	25.74
TraesCS6B01G027800.1	Wheat	extracellular	25.85	25.68
TraesCS6D01G021700.1	Wheat	peroxisome	25.17	25.34
VIT_09s0002g03520.t01	Wine grape	nucleus	25.85	25.33
HORVU4Hr1G051390.1	Barley	cytosol, mitochondrion, plastid	24.49	24.66
TraesCS4B01G011600.1	Wheat	mitochondrion, plastid	31.29	24.47
HORVU7Hr1G049600.1	Barley	mitochondrion	23.81	23.97
Zm00001d049952_P001	Maize	cytosol, extracellular	27.89	22.78
TraesCS6D01G067900.1	Wheat	extracellular	26.53	22.67
TraesCS4A01G304100.1	Wheat	plastid	29.93	22.34
TraesCS5B01G378400.2	Wheat	extracellular, vacuole	24.49	20.69
VIT_04s0008g00210.t01	Wine grape	mitochondrion	25.17	20.0
HORVU3Hr1G008710.1	Barley	mitochondrion	13.61	20.0
HORVU1Hr1G066380.1	Barley	mitochondrion	10.88	17.58
VIT_11s0016g03170.t01	Wine grape	cytosol	24.49	16.82

Protein Annotations

Gene3D:1.20.120.160	EntrezGene:100242097	wikigene:100242097	MapMan:11.4.2.2	ProteinID:CBI40247	ProteinID:CBI40247.3
ncoils:Coil	UniProt:D7UBY2	EMBL:FN596753	GO:GO:0000160	GO:GO:0003674	GO:GO:0003824
GO:GO:0004871	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0005737	GO:GO:0006464	GO:GO:0006468	GO:GO:0007154	GO:GO:0007165
GO:GO:0008150	GO:GO:0008152	GO:GO:0009719	GO:GO:0009736	GO:GO:0009927	GO:GO:0009987
GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	GO:GO:0019538	GO:GO:0043424	InterPro:HPT_dom_sf
InterPro:IPR036641	EntrezGene:LOC100242097	wikigene:LOC100242097	PANTHER:PTHR28242	PANTHER:PTHR28242:SF2	SUPFAM:SSF47226
UniParc:UPI00019847DF	ArrayExpress:VIT_13s0074g00740	EnsemblPlantsGene:VIT_13s0074g00740	EnsemblPlants:VIT_13s0074g00740.t01	RefSeq:XP_002264791	RefSeq:XP_002264791.1

Description

No Description!

Coordinates

chr13:+:9086408..9091206

Molecular Weight (calculated)

16711.2 Da

IEP (calculated)

7.303

GRAVY (calculated)

-0.274

Length

147 amino acids

Sequence
(BLAST)

001: MAANRQALNE QLQKIVDSLK EQGMLDKQFG LVHSLKESNS PFFLAEIIPM FCQNVQTILR DLTQTLDKEP VNYYDLEEYC IKLKGCTSSI GARRMALACV
101: TLRQASENKN KDGCILALNG IKHEYYNLQS SLDSIVQLER RILCHNA

Best Arabidopsis Sequence Match ( AT1G03430.1 )
(BLAST)

001: MNTIVVAQLQ RQFQDYIVSL YQQGFLDNQF SELRKLQDEG TPDFVAEVVS LFFDDCSKLI NTMSISLERP DNVDFKQVDS GVHQLKGSSS SVGARRVKNV
101: CISFKECCDV QNREGCLRCL QQVDYEYKML KTKLQDLFNL EKQILQAGGT IPQVDIN

Arabidopsis Description

AHP5histidine-containing phosphotransfer factor 5 [Source:TAIR;Acc:AT1G03430]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.