Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCSU01G197100.1 | Wheat | cytosol | 100.0 | 100.0 |
| TraesCS4A01G302200.1 | Wheat | cytosol | 99.34 | 99.34 |
| TraesCS4D01G009700.1 | Wheat | cytosol | 94.7 | 94.7 |
| TraesCS1B01G061400.1 | Wheat | cytosol | 94.7 | 94.7 |
| HORVU4Hr1G001670.1 | Barley | cytosol | 58.94 | 81.65 |
| TraesCS4B01G011600.1 | Wheat | mitochondrion, plastid | 84.11 | 67.55 |
| TraesCSU01G060100.1 | Wheat | cytosol | 55.63 | 58.74 |
| TraesCSU01G060000.1 | Wheat | cytosol | 55.63 | 58.74 |
| TraesCSU01G060300.1 | Wheat | cytosol | 56.29 | 57.43 |
| Zm00001d005344_P002 | Maize | cytosol | 52.32 | 54.48 |
| TraesCSU01G060200.3 | Wheat | cytosol | 50.99 | 53.85 |
| OQU89026 | Sorghum | cytosol | 51.66 | 53.79 |
| Os09t0567400-01 | Rice | cytosol | 51.66 | 52.35 |
| TraesCSU01G059900.1 | Wheat | cytosol | 48.34 | 51.05 |
| GSMUA_Achr8P07680_001 | Banana | extracellular | 45.7 | 46.31 |
| TraesCSU01G214800.1 | Wheat | cytosol | 47.02 | 43.29 |
| GSMUA_Achr10P... | Banana | extracellular | 42.38 | 42.95 |
| GSMUA_Achr11P... | Banana | extracellular | 41.72 | 42.28 |
| VIT_13s0074g00740.t01 | Wine grape | cytosol | 27.81 | 28.57 |
| KRH30489 | Soybean | cytosol | 24.5 | 24.5 |
Protein Annotations
| EnsemblPlants:TraesCSU01G059800.1 | EnsemblPlantsGene:TraesCSU01G059800 | Gene3D:1.20.120.160 | GO:GO:0000160 | GO:GO:0007154 | GO:GO:0007165 |
| GO:GO:0008150 | GO:GO:0009987 | InterPro:HPT_dom_sf | InterPro:IPR008207 | InterPro:IPR036641 | InterPro:Sig_transdc_His_kin_Hpt_dom |
| PANTHER:PTHR28242 | PANTHER:PTHR28242:SF6 | PFscan:PS50894 | SUPFAM:SSF47226 | MapMan:11.4.2.2 | : |
Description
No Description!
Coordinates
chrUn:-:47245455..47253583
Molecular Weight (calculated)
16776.4 Da
IEP (calculated)
5.180
GRAVY (calculated)
0.005
Length
151 amino acids
Sequence
(BLAST)
(BLAST)
001: MEAIAELRAQ LHAHLSSMYA TGAVDAYFQQ LQELDEGSGG TGYVAEVLNI FLNDGDRILR DIDALLNQPL HEVEFCKVDA LVQQLKGSSS TVGAKKVNLA
101: CMDFQKFYVA KNKKGCLMTL TLLKGDFCDV RNKLQTLMQL EQQIASLVSM W
101: CMDFQKFYVA KNKKGCLMTL TLLKGDFCDV RNKLQTLMQL EQQIASLVSM W
001: MNTIVVAQLQ RQFQDYIVSL YQQGFLDNQF SELRKLQDEG TPDFVAEVVS LFFDDCSKLI NTMSISLERP DNVDFKQVDS GVHQLKGSSS SVGARRVKNV
101: CISFKECCDV QNREGCLRCL QQVDYEYKML KTKLQDLFNL EKQILQAGGT IPQVDIN
101: CISFKECCDV QNREGCLRCL QQVDYEYKML KTKLQDLFNL EKQILQAGGT IPQVDIN
Arabidopsis Description
AHP5histidine-containing phosphotransfer factor 5 [Source:TAIR;Acc:AT1G03430]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.