Factsheet for TraesCS4D01G009700.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1B01G061400.1	Wheat	cytosol	96.03	96.03
TraesCSU01G197100.1	Wheat	cytosol	94.7	94.7
TraesCSU01G059800.1	Wheat	cytosol	94.7	94.7
TraesCS4A01G302200.1	Wheat	cytosol	94.04	94.04
HORVU4Hr1G001670.1	Barley	cytosol	60.26	83.49
TraesCS4D01G279500.1	Wheat	plastid	70.2	72.11
TraesCS4B01G011600.1	Wheat	mitochondrion, plastid	86.09	69.15
TraesCS4D01G009000.1	Wheat	cytosol	59.6	60.81
TraesCS4D01G008700.1	Wheat	cytosol	56.95	58.11
TraesCS4D01G009900.1	Wheat	cytosol	54.97	58.04
TraesCS4D01G009800.1	Wheat	cytosol	51.66	56.93
TraesCS4D01G010000.1	Wheat	cytosol	52.32	55.24
Zm00001d005344_P002	Maize	cytosol	50.99	53.1
OQU89026	Sorghum	cytosol	50.33	52.41
Os09t0567400-01	Rice	cytosol	50.99	51.68
GSMUA_Achr8P07680_001	Banana	extracellular	45.03	45.64
GSMUA_Achr10P...	Banana	extracellular	43.05	43.62
GSMUA_Achr11P...	Banana	extracellular	41.72	42.28
TraesCS7D01G012700.1	Wheat	cytosol, extracellular	31.79	36.64
TraesCS6D01G021500.2	Wheat	cytosol, extracellular	33.11	34.97
TraesCS6D01G021700.1	Wheat	peroxisome	32.45	33.56
TraesCS6D01G023100.1	Wheat	cytosol, extracellular	28.48	32.58
VIT_13s0074g00740.t01	Wine grape	cytosol	29.14	29.93
TraesCS6D01G067900.1	Wheat	extracellular	33.77	29.65
TraesCS3D01G275300.1	Wheat	cytosol	28.48	28.48
TraesCS1D01G343900.1	Wheat	cytosol, mitochondrion, nucleus, plastid	27.81	27.63
TraesCS1D01G123300.1	Wheat	nucleus	27.15	25.47
KRH30489	Soybean	cytosol	24.5	24.5

Protein Annotations

EnsemblPlants:TraesCS4D01G009700.1	EnsemblPlantsGene:TraesCS4D01G009700	Gene3D:1.20.120.160	GO:GO:0000160	GO:GO:0007154	GO:GO:0007165
GO:GO:0008150	GO:GO:0009987	InterPro:HPT_dom_sf	InterPro:IPR008207	InterPro:IPR036641	InterPro:Sig_transdc_His_kin_Hpt_dom
PANTHER:PTHR28242	PANTHER:PTHR28242:SF6	PFscan:PS50894	SUPFAM:SSF47226	MapMan:11.4.2.2	:

Description

No Description!

Coordinates

chr4D:+:4518032..4520397

Molecular Weight (calculated)

16703.3 Da

IEP (calculated)

5.666

GRAVY (calculated)

0.015

Length

151 amino acids

Sequence
(BLAST)

001: MEAITELRAQ LHAHLSSMYA TGAVDAYFQQ LQELDEGSAG TGYVAEVLNI FLNDGDRILR DIDGLLNKPL HEVEFSKVDA LVQQLKGSSS TVGAKKVNLA
101: CMDFQKFYVA KNKKGCLMAL ALLKGDFCDV RSKLQTLMQL EQQIASLVSM W

Best Arabidopsis Sequence Match ( AT1G03430.1 )
(BLAST)

001: MNTIVVAQLQ RQFQDYIVSL YQQGFLDNQF SELRKLQDEG TPDFVAEVVS LFFDDCSKLI NTMSISLERP DNVDFKQVDS GVHQLKGSSS SVGARRVKNV
101: CISFKECCDV QNREGCLRCL QQVDYEYKML KTKLQDLFNL EKQILQAGGT IPQVDIN

Arabidopsis Description

AHP5histidine-containing phosphotransfer factor 5 [Source:TAIR;Acc:AT1G03430]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.