Factsheet for TraesCS4D01G279500.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

mitochondrion 3
cytosol 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, mitochondrion, plastid, secretory
iPSORT:	mitochondrion
MultiLoc:	cytosol
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4B01G281000.1	Wheat	plastid	95.24	95.24
TraesCS4A01G022400.1	Wheat	plastid	95.24	95.24
HORVU4Hr1G074350.1	Barley	cytosol, mitochondrion	56.46	85.57
TraesCS4D01G009000.1	Wheat	cytosol	71.43	70.95
TraesCS4D01G009700.1	Wheat	cytosol	72.11	70.2
TraesCS4D01G009900.1	Wheat	cytosol	65.31	67.13
TraesCS4D01G008700.1	Wheat	cytosol	66.67	66.22
TraesCS4D01G010000.1	Wheat	cytosol	63.27	65.03
TraesCS4D01G009800.1	Wheat	cytosol	57.82	62.04
Zm00001d005344_P002	Maize	cytosol	59.86	60.69
OQU89026	Sorghum	cytosol	59.18	60.0
Os09t0567400-01	Rice	cytosol	59.18	58.39
GSMUA_Achr8P07680_001	Banana	extracellular	48.98	48.32
GSMUA_Achr11P...	Banana	extracellular	46.94	46.31
GSMUA_Achr10P...	Banana	extracellular	46.26	45.64
TraesCS6D01G021500.2	Wheat	cytosol, extracellular	39.46	40.56
TraesCS7D01G012700.1	Wheat	cytosol, extracellular	36.05	40.46
TraesCS6D01G021700.1	Wheat	peroxisome	38.1	38.36
TraesCS6D01G023100.1	Wheat	cytosol, extracellular	32.65	36.36
TraesCS6D01G067900.1	Wheat	extracellular	38.78	33.14
VIT_13s0074g00740.t01	Wine grape	cytosol	31.97	31.97
TraesCS3D01G275300.1	Wheat	cytosol	30.61	29.8
TraesCS1D01G343900.1	Wheat	cytosol, mitochondrion, nucleus, plastid	28.57	27.63
TraesCS1D01G123300.1	Wheat	nucleus	29.93	27.33
KRH30489	Soybean	cytosol	25.17	24.5

Protein Annotations

EnsemblPlants:TraesCS4D01G279500.1	EnsemblPlantsGene:TraesCS4D01G279500	Gene3D:1.20.120.160	GO:GO:0000160	GO:GO:0007154	GO:GO:0007165
GO:GO:0008150	GO:GO:0009987	InterPro:HPT_dom_sf	InterPro:IPR008207	InterPro:IPR036641	InterPro:Sig_transdc_His_kin_Hpt_dom
PANTHER:PTHR28242	PANTHER:PTHR28242:SF6	PFAM:PF01627	PFscan:PS50894	SEG:seg	SUPFAM:SSF47226
TIGR:cd00088	MapMan:11.4.2.2	:	:	:	:

Description

No Description!

Coordinates

chr4D:-:450683862..450686366

Molecular Weight (calculated)

16180.7 Da

IEP (calculated)

6.505

GRAVY (calculated)

0.115

Length

147 amino acids

Sequence
(BLAST)

001: MAAAALRAQL NAHIASMYAT GSVDAYFQQL QSMDEGSATT GFVAEVINIF LNDADRILND IAGLLNQPEV DFYKVDALVH QLIGSSSTVG AKKVKLACMQ
101: FRQSYVAKSK ERCLMALALL RNEFCDVRNQ LQIMMQLERQ IAASSPM

Best Arabidopsis Sequence Match ( AT1G03430.1 )
(BLAST)

001: MNTIVVAQLQ RQFQDYIVSL YQQGFLDNQF SELRKLQDEG TPDFVAEVVS LFFDDCSKLI NTMSISLERP DNVDFKQVDS GVHQLKGSSS SVGARRVKNV
101: CISFKECCDV QNREGCLRCL QQVDYEYKML KTKLQDLFNL EKQILQAGGT IPQVDIN

Arabidopsis Description

AHP5histidine-containing phosphotransfer factor 5 [Source:TAIR;Acc:AT1G03430]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.