Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 3
- vacuole 3
- plasma membrane 3
- golgi 3
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6D01G021500.2 | Wheat | cytosol, extracellular | 71.51 | 86.01 |
| TraesCS6D01G021700.1 | Wheat | peroxisome | 72.67 | 85.62 |
| TraesCS5B01G378400.2 | Wheat | extracellular, vacuole | 76.74 | 75.86 |
| TraesCS6D01G023100.1 | Wheat | cytosol, extracellular | 58.14 | 75.76 |
| TraesCS7D01G012700.1 | Wheat | cytosol, extracellular | 50.58 | 66.41 |
| EES15189 | Sorghum | cytosol, extracellular | 49.42 | 59.03 |
| Os08t0557700-01 | Rice | cytosol, plastid | 48.26 | 56.46 |
| Zm00001d031961_P002 | Maize | cytosol, extracellular | 47.09 | 55.1 |
| TraesCS4D01G009000.1 | Wheat | cytosol | 42.44 | 49.32 |
| Zm00001d049952_P001 | Maize | cytosol, extracellular | 49.42 | 47.22 |
| GSMUA_Achr11P... | Banana | extracellular | 40.12 | 46.31 |
| GSMUA_Achr10P... | Banana | extracellular | 39.53 | 45.64 |
| GSMUA_Achr8P07680_001 | Banana | extracellular | 39.53 | 45.64 |
| TraesCS4D01G010000.1 | Wheat | cytosol | 33.72 | 40.56 |
| TraesCS4D01G279500.1 | Wheat | plastid | 33.14 | 38.78 |
| TraesCS4D01G008700.1 | Wheat | cytosol | 31.98 | 37.16 |
| TraesCS4D01G009800.1 | Wheat | cytosol | 28.49 | 35.77 |
| TraesCS4D01G009900.1 | Wheat | cytosol | 29.65 | 35.66 |
| TraesCS4D01G009700.1 | Wheat | cytosol | 29.65 | 33.77 |
| TraesCS3D01G275300.1 | Wheat | cytosol | 25.58 | 29.14 |
| TraesCS1D01G343900.1 | Wheat | cytosol, mitochondrion, nucleus, plastid | 23.84 | 26.97 |
| VIT_13s0074g00740.t01 | Wine grape | cytosol | 22.67 | 26.53 |
| TraesCS1D01G123300.1 | Wheat | nucleus | 23.84 | 25.47 |
| KRH30489 | Soybean | cytosol | 20.93 | 23.84 |
Protein Annotations
| EnsemblPlants:TraesCS6D01G067900.1 | EnsemblPlantsGene:TraesCS6D01G067900 | Gene3D:1.20.120.160 | GO:GO:0000160 | GO:GO:0007154 | GO:GO:0007165 |
| GO:GO:0008150 | GO:GO:0009987 | InterPro:HPT_dom_sf | InterPro:IPR008207 | InterPro:IPR036641 | InterPro:Sig_transdc_His_kin_Hpt_dom |
| PANTHER:PTHR28242 | PANTHER:PTHR28242:SF6 | PFAM:PF01627 | SEG:seg | SignalP:SignalP-noTM | SUPFAM:SSF47226 |
| MapMan:11.4.2.2 | : | : | : | : | : |
Description
No Description!
Coordinates
chr6D:+:34080010..34085004
Molecular Weight (calculated)
18672.9 Da
IEP (calculated)
6.728
GRAVY (calculated)
0.147
Length
172 amino acids
Sequence
(BLAST)
(BLAST)
001: MLDFLMAAHL CLKRLASALV SLLRVAMAAP MLNQPNSLLA NMFAAGLLDD QFQELQMLQE GSAPDFIVKV VTLFCEDGER IIGEIAKLLD KPCVDYDKVG
101: GFVRQLKGSS ASIGALRVKN SCIQFHQCCQ EKSKDGCVNS LDSVRNDFYD LCSMFKLHAS AGPAGAGLNP KQ
101: GFVRQLKGSS ASIGALRVKN SCIQFHQCCQ EKSKDGCVNS LDSVRNDFYD LCSMFKLHAS AGPAGAGLNP KQ
001: MDALIAQLQR QFRDYTISLY QQGFLDDQFT ELKKLQDDGS PDFVSEVLSL FFEDCVKLIS NMARALDTTG TVDFSQVGAS VHQLKGSSSS VGAKRVKTLC
101: VSFKECCEAK NYEGCVRCLQ QVDIEYKALK TKLQDMFNLE KQIIQAGGIV PQVDIN
101: VSFKECCEAK NYEGCVRCLQ QVDIEYKALK TKLQDMFNLE KQIIQAGGIV PQVDIN
Arabidopsis Description
AHP2AHP2 [Source:UniProtKB/TrEMBL;Acc:A0A178VEN2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.