Subcellular Localization
min:
: max
Winner_takes_all: extracellular, vacuole
Predictor Summary:
Predictor Summary:
- cytosol 1
- extracellular 3
- endoplasmic reticulum 2
- vacuole 3
- plasma membrane 2
- golgi 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6B01G027800.1 | Wheat | extracellular | 72.41 | 85.14 |
| TraesCS6D01G067900.1 | Wheat | extracellular | 75.86 | 76.74 |
| EES15189 | Sorghum | cytosol, extracellular | 47.7 | 57.64 |
| Os08t0557700-01 | Rice | cytosol, plastid | 48.28 | 57.14 |
| Zm00001d031961_P002 | Maize | cytosol, extracellular | 47.7 | 56.46 |
| TraesCS4B01G010300.1 | Wheat | extracellular | 41.38 | 48.98 |
| GSMUA_Achr11P... | Banana | extracellular | 40.23 | 46.98 |
| Zm00001d049952_P001 | Maize | cytosol, extracellular | 48.28 | 46.67 |
| GSMUA_Achr10P... | Banana | extracellular | 39.08 | 45.64 |
| GSMUA_Achr8P07680_001 | Banana | extracellular | 39.08 | 45.64 |
| TraesCS4B01G281000.1 | Wheat | plastid | 33.33 | 39.46 |
| TraesCS1B01G061500.1 | Wheat | cytosol | 32.18 | 39.16 |
| TraesCS4B01G011700.1 | Wheat | cytosol | 30.46 | 37.06 |
| TraesCS1B01G061400.1 | Wheat | cytosol | 29.31 | 33.77 |
| TraesCS1B01G141500.1 | Wheat | nucleus | 25.86 | 29.8 |
| TraesCS4B01G011600.1 | Wheat | mitochondrion, plastid | 31.61 | 29.26 |
| TraesCS3B01G309100.1 | Wheat | cytosol | 24.14 | 27.81 |
| TraesCS1B01G354300.1 | Wheat | cytosol, mitochondrion, nucleus, plastid | 23.56 | 26.97 |
| VIT_13s0074g00740.t01 | Wine grape | cytosol | 20.69 | 24.49 |
| KRH30489 | Soybean | cytosol | 18.39 | 21.19 |
Protein Annotations
| EnsemblPlants:TraesCS5B01G378400.2 | EnsemblPlantsGene:TraesCS5B01G378400 | Gene3D:1.20.120.160 | GO:GO:0000160 | GO:GO:0007154 | GO:GO:0007165 |
| GO:GO:0008150 | GO:GO:0009987 | InterPro:HPT_dom_sf | InterPro:IPR036641 | PANTHER:PTHR28242 | PANTHER:PTHR28242:SF6 |
| SUPFAM:SSF47226 | MapMan:11.4.2.2 | : | : | : | : |
Description
No Description!
Coordinates
chr5B:-:556782227..556786076
Molecular Weight (calculated)
19227.4 Da
IEP (calculated)
8.060
GRAVY (calculated)
-0.076
Length
174 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAPMLNQPN GLLANMFAAG LLDDQFQELQ MLQEGSAPDF IVKVVSLFCE DGERIIGEIA KLLDKPCVDY DKVGGFVHQL KGSSARSVKY HMFRTHQAAQ
101: RVALHIVGLF QLIRLGAQRV KNSCIQFQQC CQEKSRDGCL NSLQSVRNDF YDLCSMFKPH ASAVPAGPGL NPKV
101: RVALHIVGLF QLIRLGAQRV KNSCIQFQQC CQEKSRDGCL NSLQSVRNDF YDLCSMFKPH ASAVPAGPGL NPKV
001: MDALIAQLQR QFRDYTISLY QQGFLDDQFT ELKKLQDDGS PDFVSEVLSL FFEDCVKLIS NMARALDTTG TVDFSQVGAS VHQLKGSSSS VGAKRVKTLC
101: VSFKECCEAK NYEGCVRCLQ QVDIEYKALK TKLQDMFNLE KQIIQAGGIV PQVDIN
101: VSFKECCEAK NYEGCVRCLQ QVDIEYKALK TKLQDMFNLE KQIIQAGGIV PQVDIN
Arabidopsis Description
AHP2AHP2 [Source:UniProtKB/TrEMBL;Acc:A0A178VEN2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.