Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- extracellular 2
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 2
- golgi 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4D01G010000.1 | Wheat | cytosol | 88.11 | 88.11 |
| TraesCSU01G060200.3 | Wheat | cytosol | 85.31 | 85.31 |
| TraesCS1B01G061500.1 | Wheat | cytosol | 83.92 | 83.92 |
| TraesCSU01G059900.1 | Wheat | cytosol | 79.02 | 79.02 |
| HORVU4Hr1G001650.1 | Barley | extracellular | 74.83 | 74.83 |
| TraesCS4B01G010300.1 | Wheat | extracellular | 65.73 | 63.95 |
| TraesCS4B01G281000.1 | Wheat | plastid | 62.24 | 60.54 |
| Os09t0567400-01 | Rice | cytosol | 58.04 | 55.7 |
| Zm00001d005344_P002 | Maize | cytosol | 55.24 | 54.48 |
| OQU89026 | Sorghum | cytosol | 53.85 | 53.1 |
| TraesCS1B01G061400.1 | Wheat | cytosol | 55.24 | 52.32 |
| GSMUA_Achr8P07680_001 | Banana | extracellular | 46.15 | 44.3 |
| GSMUA_Achr11P... | Banana | extracellular | 45.45 | 43.62 |
| GSMUA_Achr10P... | Banana | extracellular | 44.76 | 42.95 |
| TraesCS4B01G011600.1 | Wheat | mitochondrion, plastid | 54.55 | 41.49 |
| TraesCS6B01G027800.1 | Wheat | extracellular | 38.46 | 37.16 |
| VIT_13s0074g00740.t01 | Wine grape | cytosol | 32.87 | 31.97 |
| TraesCS5B01G378400.2 | Wheat | extracellular, vacuole | 37.06 | 30.46 |
| TraesCS1B01G354300.1 | Wheat | cytosol, mitochondrion, nucleus, plastid | 29.37 | 27.63 |
| TraesCS1B01G141500.1 | Wheat | nucleus | 27.27 | 25.83 |
| TraesCS3B01G309100.1 | Wheat | cytosol | 25.87 | 24.5 |
| KRH30489 | Soybean | cytosol | 23.78 | 22.52 |
Protein Annotations
| EnsemblPlants:TraesCS4B01G011700.1 | EnsemblPlantsGene:TraesCS4B01G011700 | Gene3D:1.20.120.160 | GO:GO:0000160 | GO:GO:0007154 | GO:GO:0007165 |
| GO:GO:0008150 | GO:GO:0009987 | InterPro:HPT_dom_sf | InterPro:IPR008207 | InterPro:IPR036641 | InterPro:Sig_transdc_His_kin_Hpt_dom |
| PANTHER:PTHR28242 | PANTHER:PTHR28242:SF6 | PFAM:PF01627 | SEG:seg | SUPFAM:SSF47226 | MapMan:11.4.2.2 |
Description
No Description!
Coordinates
chr4B:+:7540825..7543812
Molecular Weight (calculated)
15881.4 Da
IEP (calculated)
5.545
GRAVY (calculated)
0.177
Length
143 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAAALKAQL NALLDSMFAT GIVDEGFQHL RSVEQEGFLA QVINIFLHDA DNILHEIARL LNLPVVNFGR VGALVHELKG CSGSVVAKKV NLSCTHFRQF
101: YEAESKEGCL MALDLVRNEF YEVFNKLQTM MQLEQQIAAM GPQ
101: YEAESKEGCL MALDLVRNEF YEVFNKLQTM MQLEQQIAAM GPQ
001: MDLVQKQKSL QDYTKSLFLE GILDSQFLQL QQLQDESNPD FVSQVVTLFF QDSDRILNDL SLSLDQQVVD FKKVDPHVHQ LKGSSSSIGA QRVKNACVVF
101: RSFCEQQNVE ACHRCLQQVK QEYYLVKNRL ETLFKLEQQI VASGGMIPAV ELGF
101: RSFCEQQNVE ACHRCLQQVK QEYYLVKNRL ETLFKLEQQI VASGGMIPAV ELGF
Arabidopsis Description
AHP1AHP1 [Source:UniProtKB/TrEMBL;Acc:A0A178V856]
SUBAcon: [plastid,nucleus,cytosol]
SUBAcon: [plastid,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.