Factsheet for TraesCS4D01G009000.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

mitochondrion 1
cytosol 2
extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 2
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid, secretory
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4A01G303500.1	Wheat	cytosol	93.92	94.56
TraesCS4B01G010300.1	Wheat	extracellular	93.24	93.88
HORVU7Hr1G049600.1	Barley	mitochondrion	73.65	74.66
HORVU4Hr1G051390.1	Barley	cytosol, mitochondrion, plastid	73.65	74.66
Zm00001d005344_P002	Maize	cytosol	72.97	74.48
OQU89026	Sorghum	cytosol	71.62	73.1
Os09t0567400-01	Rice	cytosol	72.3	71.81
TraesCS4D01G279500.1	Wheat	plastid	70.95	71.43
TraesCS4D01G010000.1	Wheat	cytosol	66.22	68.53
TraesCS4D01G008700.1	Wheat	cytosol	68.24	68.24
HORVU3Hr1G008710.1	Barley	mitochondrion	42.57	63.0
TraesCS4D01G009900.1	Wheat	cytosol	59.46	61.54
HORVU1Hr1G066380.1	Barley	mitochondrion	37.16	60.44
TraesCS4D01G009700.1	Wheat	cytosol	60.81	59.6
TraesCS4D01G009800.1	Wheat	cytosol	54.05	58.39
GSMUA_Achr11P...	Banana	extracellular	58.11	57.72
GSMUA_Achr8P07680_001	Banana	extracellular	58.11	57.72
GSMUA_Achr10P...	Banana	extracellular	56.08	55.7
TraesCS6D01G021500.2	Wheat	cytosol, extracellular	47.97	49.65
TraesCS6D01G021700.1	Wheat	peroxisome	47.3	47.95
TraesCS6D01G023100.1	Wheat	cytosol, extracellular	41.89	46.97
TraesCS7D01G012700.1	Wheat	cytosol, extracellular	40.54	45.8
TraesCS6D01G067900.1	Wheat	extracellular	49.32	42.44
TraesCS3D01G275300.1	Wheat	cytosol	36.49	35.76
TraesCS1D01G343900.1	Wheat	cytosol, mitochondrion, nucleus, plastid	34.46	33.55
VIT_13s0074g00740.t01	Wine grape	cytosol	32.43	32.65
TraesCS1D01G123300.1	Wheat	nucleus	31.76	29.19
KRH30489	Soybean	cytosol	25.68	25.17

Protein Annotations

EnsemblPlants:TraesCS4D01G009000.1	EnsemblPlantsGene:TraesCS4D01G009000	Gene3D:1.20.120.160	GO:GO:0000160	GO:GO:0007154	GO:GO:0007165
GO:GO:0008150	GO:GO:0009987	InterPro:HPT_dom_sf	InterPro:IPR008207	InterPro:IPR036641	InterPro:Sig_transdc_His_kin_Hpt_dom
PANTHER:PTHR28242	PANTHER:PTHR28242:SF6	PFAM:PF01627	PFscan:PS50894	SEG:seg	SUPFAM:SSF47226
TIGR:cd00088	MapMan:11.4.2.2	:	:	:	:

Description

No Description!

Coordinates

chr4D:-:4348756..4351589

Molecular Weight (calculated)

16233.6 Da

IEP (calculated)

4.915

GRAVY (calculated)

0.024

Length

148 amino acids

Sequence
(BLAST)

001: MAAAALRAQL NALLANMFTT GMVDEQFQQL QSLQEDGGSA SGFVAEVATL FIDDADRIIA DIAALLDRPV VDFDKVDAHV HQLKGSSSSV GAQKVKLACM
101: HFRQFYEAKS KEGCLMALAL VRSEFCDVRN KFQTMMQLEQ QIEACSPK

Best Arabidopsis Sequence Match ( AT3G21510.1 )
(BLAST)

001: MDLVQKQKSL QDYTKSLFLE GILDSQFLQL QQLQDESNPD FVSQVVTLFF QDSDRILNDL SLSLDQQVVD FKKVDPHVHQ LKGSSSSIGA QRVKNACVVF
101: RSFCEQQNVE ACHRCLQQVK QEYYLVKNRL ETLFKLEQQI VASGGMIPAV ELGF

Arabidopsis Description

AHP1AHP1 [Source:UniProtKB/TrEMBL;Acc:A0A178V856]
SUBAcon: [plastid,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.