Factsheet for TraesCS4D01G008700.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCSU01G060300.1	Wheat	cytosol	89.86	89.86
HORVU4Hr1G001590.1	Barley	plastid	83.78	83.78
TraesCS4D01G009000.1	Wheat	cytosol	68.24	68.24
TraesCS4A01G304100.1	Wheat	plastid	89.86	67.51
TraesCS4D01G010000.1	Wheat	cytosol	64.86	67.13
TraesCS4D01G279500.1	Wheat	plastid	66.22	66.67
TraesCS4D01G009900.1	Wheat	cytosol	62.16	64.34
TraesCS4D01G009800.1	Wheat	cytosol	56.76	61.31
Zm00001d005344_P002	Maize	cytosol	56.08	57.24
TraesCS4D01G009700.1	Wheat	cytosol	58.11	56.95
OQU89026	Sorghum	cytosol	54.73	55.86
Os09t0567400-01	Rice	cytosol	56.08	55.7
GSMUA_Achr11P...	Banana	extracellular	49.32	48.99
GSMUA_Achr10P...	Banana	extracellular	48.65	48.32
GSMUA_Achr8P07680_001	Banana	extracellular	48.65	48.32
TraesCS6D01G021500.2	Wheat	cytosol, extracellular	37.16	38.46
TraesCS7D01G012700.1	Wheat	cytosol, extracellular	33.11	37.4
TraesCS6D01G021700.1	Wheat	peroxisome	36.49	36.99
TraesCS6D01G023100.1	Wheat	cytosol, extracellular	32.43	36.36
TraesCS6D01G067900.1	Wheat	extracellular	37.16	31.98
VIT_13s0074g00740.t01	Wine grape	cytosol	28.38	28.57
TraesCS3D01G275300.1	Wheat	cytosol	27.7	27.15
TraesCS1D01G343900.1	Wheat	cytosol, mitochondrion, nucleus, plastid	26.35	25.66
TraesCS1D01G123300.1	Wheat	nucleus	27.03	24.84
KRH30489	Soybean	cytosol	22.97	22.52

Protein Annotations

EnsemblPlants:TraesCS4D01G008700.1	EnsemblPlantsGene:TraesCS4D01G008700	Gene3D:1.20.120.160	GO:GO:0000160	GO:GO:0007154	GO:GO:0007165
GO:GO:0008150	GO:GO:0009987	InterPro:HPT_dom_sf	InterPro:IPR008207	InterPro:IPR036641	InterPro:Sig_transdc_His_kin_Hpt_dom
PANTHER:PTHR28242	PANTHER:PTHR28242:SF6	PFAM:PF01627	PFscan:PS50894	SUPFAM:SSF47226	MapMan:11.4.2.2

Description

No Description!

Coordinates

chr4D:-:4272593..4274956

Molecular Weight (calculated)

16226.5 Da

IEP (calculated)

4.857

GRAVY (calculated)

0.061

Length

148 amino acids

Sequence
(BLAST)

001: MSAAALRARL NNHVTSMFAT DTVDEYFQYL QSVDEDGSSA PGLVAEVINL FIGDANSILN GIASLLNQTM VDFNKVDDLV HQLKGCSCSV GAKKVNLSCM
101: HFHQFIEARS KEGCLMALAL LTNEFCDVRD KFQTMMQLEQ QIAACGPK

Best Arabidopsis Sequence Match ( AT3G21510.1 )
(BLAST)

001: MDLVQKQKSL QDYTKSLFLE GILDSQFLQL QQLQDESNPD FVSQVVTLFF QDSDRILNDL SLSLDQQVVD FKKVDPHVHQ LKGSSSSIGA QRVKNACVVF
101: RSFCEQQNVE ACHRCLQQVK QEYYLVKNRL ETLFKLEQQI VASGGMIPAV ELGF

Arabidopsis Description

AHP1AHP1 [Source:UniProtKB/TrEMBL;Acc:A0A178V856]
SUBAcon: [plastid,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.