Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 4
- mitochondrion 3
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCSU01G060300.1 | Wheat | cytosol | 75.13 | 100.0 |
| TraesCS4D01G008700.1 | Wheat | cytosol | 67.51 | 89.86 |
| HORVU4Hr1G001590.1 | Barley | plastid | 63.45 | 84.46 |
| TraesCS4A01G303500.1 | Wheat | cytosol | 49.75 | 66.67 |
| TraesCS4A01G022400.1 | Wheat | plastid | 49.75 | 66.67 |
| Zm00001d005344_P002 | Maize | cytosol | 42.64 | 57.93 |
| Os09t0567400-01 | Rice | cytosol | 43.65 | 57.72 |
| OQU89026 | Sorghum | cytosol | 42.13 | 57.24 |
| TraesCS4A01G302200.1 | Wheat | cytosol | 43.15 | 56.29 |
| GSMUA_Achr8P07680_001 | Banana | extracellular | 37.56 | 49.66 |
| GSMUA_Achr11P... | Banana | extracellular | 37.56 | 49.66 |
| GSMUA_Achr10P... | Banana | extracellular | 37.06 | 48.99 |
| TraesCS6A01G020400.1 | Wheat | extracellular | 28.93 | 39.58 |
| TraesCS4A01G480800.1 | Wheat | cytosol, extracellular | 25.89 | 38.93 |
| TraesCS7A01G016100.1 | Wheat | cytosol, extracellular | 25.89 | 38.93 |
| TraesCS4A01G479600.1 | Wheat | cytosol | 25.38 | 38.17 |
| TraesCS4A01G480600.1 | Wheat | cytosol, extracellular | 27.41 | 38.03 |
| TraesCS4A01G480700.2 | Wheat | cytosol, extracellular | 25.89 | 37.5 |
| VIT_13s0074g00740.t01 | Wine grape | cytosol | 22.34 | 29.93 |
| TraesCS1A01G341600.1 | Wheat | cytosol, mitochondrion, nucleus, plastid | 20.3 | 26.32 |
| TraesCS1A01G122300.1 | Wheat | nucleus | 21.32 | 26.09 |
| KRH30489 | Soybean | cytosol | 16.75 | 21.85 |
| TraesCS3A01G275400.2 | Wheat | extracellular, mitochondrion | 19.29 | 20.99 |
Protein Annotations
| EnsemblPlants:TraesCS4A01G304100.1 | EnsemblPlantsGene:TraesCS4A01G304100 | Gene3D:1.20.120.160 | GO:GO:0000160 | GO:GO:0007154 | GO:GO:0007165 |
| GO:GO:0008150 | GO:GO:0009987 | InterPro:HPT_dom_sf | InterPro:IPR008207 | InterPro:IPR036641 | InterPro:Sig_transdc_His_kin_Hpt_dom |
| PANTHER:PTHR28242 | PANTHER:PTHR28242:SF6 | PFAM:PF01627 | SEG:seg | SUPFAM:SSF47226 | TIGR:cd00088 |
| MapMan:11.4.2.2 | : | : | : | : | : |
Description
No Description!
Coordinates
chr4A:+:599628039..599630576
Molecular Weight (calculated)
21385.9 Da
IEP (calculated)
6.238
GRAVY (calculated)
-0.034
Length
197 amino acids
Sequence
(BLAST)
(BLAST)
001: MVALPAKRLP PAEPRASRYI RGSIDPKPPP TLPQTTPPPA PQLPSDPFAM SAAALRALLN SHVTSMFNTG TVDEYFQYLQ SVEEDGSSAP GLVAEVINLF
101: IGDANSILNG IAGLLNQPVV DFNKVDDLVH QLKGCSCSVG AKKVNLCCMY FHQFIESRSK EGCLMALSLL RNEFCDVCNK FQTMMQLEQQ IAACGPK
101: IGDANSILNG IAGLLNQPVV DFNKVDDLVH QLKGCSCSVG AKKVNLCCMY FHQFIESRSK EGCLMALSLL RNEFCDVCNK FQTMMQLEQQ IAACGPK
001: MDLVQKQKSL QDYTKSLFLE GILDSQFLQL QQLQDESNPD FVSQVVTLFF QDSDRILNDL SLSLDQQVVD FKKVDPHVHQ LKGSSSSIGA QRVKNACVVF
101: RSFCEQQNVE ACHRCLQQVK QEYYLVKNRL ETLFKLEQQI VASGGMIPAV ELGF
101: RSFCEQQNVE ACHRCLQQVK QEYYLVKNRL ETLFKLEQQI VASGGMIPAV ELGF
Arabidopsis Description
AHP1AHP1 [Source:UniProtKB/TrEMBL;Acc:A0A178V856]
SUBAcon: [plastid,nucleus,cytosol]
SUBAcon: [plastid,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.