Factsheet for TraesCSU01G214800.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	secretory
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCSU01G060100.1	Wheat	cytosol	66.46	76.22
TraesCSU01G060000.1	Wheat	cytosol	66.46	76.22
HORVU4Hr1G001660.1	Barley	cytosol	65.24	74.31
TraesCS4D01G009800.1	Wheat	cytosol	61.59	73.72
TraesCSU01G059900.1	Wheat	cytosol	50.61	58.04
TraesCSU01G060200.3	Wheat	cytosol	46.95	53.85
TraesCSU01G060300.1	Wheat	cytosol	45.73	50.68
TraesCSU01G197100.1	Wheat	cytosol	43.29	47.02
TraesCSU01G059800.1	Wheat	cytosol	43.29	47.02
Os09t0567400-01	Rice	cytosol	41.46	45.64
Zm00001d005344_P002	Maize	cytosol	39.02	44.14
OQU89026	Sorghum	cytosol	37.8	42.76
GSMUA_Achr8P07680_001	Banana	extracellular	37.2	40.94
GSMUA_Achr10P...	Banana	extracellular	36.59	40.27
GSMUA_Achr11P...	Banana	extracellular	35.98	39.6
VIT_13s0074g00740.t01	Wine grape	cytosol	27.44	30.61
KRH30489	Soybean	cytosol	18.9	20.53

Protein Annotations

EnsemblPlants:TraesCSU01G214800.1	EnsemblPlantsGene:TraesCSU01G214800	Gene3D:1.20.120.160	GO:GO:0000160	GO:GO:0007154	GO:GO:0007165
GO:GO:0008150	GO:GO:0009987	InterPro:HPT_dom_sf	InterPro:IPR036641	PANTHER:PTHR28242	PANTHER:PTHR28242:SF6
SUPFAM:SSF47226	MapMan:11.4.2.2	:	:	:	:

Description

No Description!

Coordinates

chrUn:-:318052533..318055136

Molecular Weight (calculated)

18945.3 Da

IEP (calculated)

4.753

GRAVY (calculated)

0.156

Length

164 amino acids

Sequence
(BLAST)

001: MPAAELRSQL NTRVSYMYAM GILDEYYQEL QPPQDEGFVP EVINMFLHQA DMMLNDITSL LNLPVVDFEM VGELVHQLKE YSGSFLIVLF LACISVGARK
101: VNLACVHFQQ FYEGKSKERC LMALNVLRNE FYDVRDRLQT IMQVASYVPV LAFDFQLLKS IKNM

Best Arabidopsis Sequence Match ( AT3G21510.1 )
(BLAST)

001: MDLVQKQKSL QDYTKSLFLE GILDSQFLQL QQLQDESNPD FVSQVVTLFF QDSDRILNDL SLSLDQQVVD FKKVDPHVHQ LKGSSSSIGA QRVKNACVVF
101: RSFCEQQNVE ACHRCLQQVK QEYYLVKNRL ETLFKLEQQI VASGGMIPAV ELGF

Arabidopsis Description

AHP1AHP1 [Source:UniProtKB/TrEMBL;Acc:A0A178V856]
SUBAcon: [plastid,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.