Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH47212 | Soybean | cytosol, nucleus, plastid | 72.0 | 75.52 |
| KRH09934 | Soybean | nucleus | 74.67 | 74.67 |
| KRH23400 | Soybean | nucleus | 73.33 | 73.33 |
| AT3G16360.2 | Thale cress | nucleus | 70.67 | 73.1 |
| CDX75878 | Canola | cytosol | 62.67 | 70.68 |
| CDX82406 | Canola | cytosol | 62.0 | 69.92 |
| CDY30166 | Canola | cytosol | 62.0 | 69.92 |
| Bra027169.1-P | Field mustard | cytosol, nucleus, plastid | 56.0 | 67.74 |
| CDY56195 | Canola | cytosol, nucleus, plastid | 56.0 | 67.74 |
| KRH44276 | Soybean | nucleus | 72.0 | 66.26 |
| GSMUA_Achr11P... | Banana | nucleus | 65.33 | 64.47 |
| GSMUA_Achr10P... | Banana | nucleus | 62.67 | 62.25 |
| Bra001629.1-P | Field mustard | cytosol | 54.67 | 60.29 |
| Os01t0743800-00 | Rice | cytosol, nucleus, plastid | 60.0 | 59.6 |
| GSMUA_Achr9P16250_001 | Banana | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 58.0 | 59.18 |
| TraesCS1B01G354300.1 | Wheat | cytosol, mitochondrion, nucleus, plastid | 57.33 | 56.58 |
| TraesCS1D01G343900.1 | Wheat | cytosol, mitochondrion, nucleus, plastid | 57.33 | 56.58 |
| VIT_04s0008g00210.t01 | Wine grape | mitochondrion | 69.33 | 56.22 |
| TraesCS1A01G341600.1 | Wheat | cytosol, mitochondrion, nucleus, plastid | 56.67 | 55.92 |
| HORVU3Hr1G070880.7 | Barley | cytosol | 56.67 | 55.92 |
| TraesCS3B01G309100.1 | Wheat | cytosol | 56.0 | 55.63 |
| TraesCS3D01G275300.1 | Wheat | cytosol | 55.33 | 54.97 |
| TraesCS1B01G141500.1 | Wheat | nucleus | 54.67 | 54.3 |
| Os05t0186100-01 | Rice | nucleus | 54.67 | 54.3 |
| EES19834 | Sorghum | cytosol, nucleus, plastid | 54.67 | 53.25 |
| OQU77568 | Sorghum | nucleus | 52.67 | 52.32 |
| Zm00001d037694_P001 | Maize | cytosol | 58.0 | 48.88 |
| Zm00001d043505_P001 | Maize | cytosol | 57.33 | 48.31 |
| HORVU1Hr1G027980.32 | Barley | mitochondrion | 54.67 | 45.56 |
| VIT_14s0030g00410.t01 | Wine grape | cytosol | 45.33 | 45.33 |
| VIT_07s0104g00880.t01 | Wine grape | cytosol, nucleus, plastid | 45.33 | 45.03 |
| Zm00001d010791_P001 | Maize | mitochondrion | 51.33 | 45.03 |
| VIT_05s0020g02210.t01 | Wine grape | cytosol | 44.67 | 44.08 |
| OQU87518 | Sorghum | cytosol | 54.67 | 43.62 |
| TraesCS1A01G122300.1 | Wheat | nucleus | 45.33 | 42.24 |
| TraesCS1D01G123300.1 | Wheat | nucleus | 45.33 | 42.24 |
| TraesCS3A01G275400.2 | Wheat | extracellular, mitochondrion | 50.67 | 41.99 |
| HORVU1Hr1G075830.31 | Barley | cytosol, mitochondrion, plastid | 50.0 | 34.72 |
| VIT_09s0002g06960.t01 | Wine grape | cytosol | 35.33 | 33.97 |
| VIT_11s0016g03170.t01 | Wine grape | cytosol | 46.67 | 32.71 |
| PGSC0003DMT400094075 | Potato | nucleus | 40.0 | 29.56 |
| VIT_13s0074g00740.t01 | Wine grape | cytosol | 25.33 | 25.85 |
Protein Annotations
| Gene3D:1.20.120.160 | EntrezGene:100246353 | wikigene:100246353 | MapMan:11.4.2.2 | ProteinID:ACO88938 | ProteinID:ACO88938.1 |
| ProteinID:CBI36060 | ProteinID:CBI36060.3 | UniProt:D7U0B4 | EMBL:FJ822977 | EMBL:FN596494 | GO:GO:0000160 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004871 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005737 | GO:GO:0006464 | GO:GO:0006468 |
| GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009719 | GO:GO:0009736 |
| GO:GO:0009927 | GO:GO:0009987 | GO:GO:0016301 | GO:GO:0016310 | GO:GO:0016740 | GO:GO:0019538 |
| GO:GO:0043424 | EntrezGene:HP2 | wikigene:HP2 | InterPro:HPT_dom_sf | InterPro:IPR008207 | InterPro:IPR036641 |
| PFAM:PF01627 | PFscan:PS50894 | PANTHER:PTHR28242 | PANTHER:PTHR28242:SF4 | SUPFAM:SSF47226 | InterPro:Sig_transdc_His_kin_Hpt_dom |
| UniParc:UPI0001983F78 | ArrayExpress:VIT_09s0002g03520 | EnsemblPlantsGene:VIT_09s0002g03520 | EnsemblPlants:VIT_09s0002g03520.t01 | unigene:Vvi.21875 | RefSeq:XP_002283686 |
| RefSeq:XP_002283686.1 | : | : | : | : | : |
Description
No Description!
Coordinates
chr9:-:3186204..3187618
Molecular Weight (calculated)
17361.8 Da
IEP (calculated)
8.315
GRAVY (calculated)
-0.628
Length
150 amino acids
Sequence
(BLAST)
(BLAST)
001: MERTQQHRQV AHMRQSLFDQ GLLDEQFVQL EELQDDANPN FVEEVVTLFY RDSARLVLNI DQALDKTPLD FSKLDSYMHQ FKGSASSIGA KKVKGECTLF
101: REYCKAGNGE GCMKTFQQLK KDYAVLRKKL ETYFQLARQV GPVETACRRK
101: REYCKAGNGE GCMKTFQQLK KDYAVLRKKL ETYFQLARQV GPVETACRRK
001: MQRQVALIKQ SLFDQGYLDE QFMELEELQD DANPNFVEEV SALYFKDSAR LINNIDQALE RGSFDFNRLD SYMHQFKGSS TSIGASKVKA ECTTFREYCR
101: AGNAEGCLRT FQQLKKEHST LRKKLEHYFQ LARQAGPKET ARRPK
101: AGNAEGCLRT FQQLKKEHST LRKKLEHYFQ LARQAGPKET ARRPK
Arabidopsis Description
AHP4AHP4 [Source:UniProtKB/TrEMBL;Acc:A0A178V965]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.