Subcellular Localization
min:
: max
Winner_takes_all: extracellular, endoplasmic reticulum, vacuole, cytosol, plasma membrane, golgi
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- extracellular 3
- endoplasmic reticulum 3
- vacuole 3
- plasma membrane 3
- golgi 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr11P... | Banana | nucleus | 76.19 | 73.68 |
| GSMUA_Achr10P... | Banana | nucleus | 65.99 | 64.24 |
| Bra027169.1-P | Field mustard | cytosol, nucleus, plastid | 49.66 | 58.87 |
| CDY56195 | Canola | cytosol, nucleus, plastid | 49.66 | 58.87 |
| Os05t0186100-01 | Rice | nucleus | 59.86 | 58.28 |
| VIT_09s0002g03520.t01 | Wine grape | nucleus | 59.18 | 58.0 |
| CDY30166 | Canola | cytosol | 51.7 | 57.14 |
| TraesCS1B01G141500.1 | Wheat | nucleus | 58.5 | 56.95 |
| AT3G16360.2 | Thale cress | nucleus | 55.1 | 55.86 |
| CDX82406 | Canola | cytosol | 50.34 | 55.64 |
| CDX75878 | Canola | cytosol | 50.34 | 55.64 |
| KRH09934 | Soybean | nucleus | 56.46 | 55.33 |
| KRH47212 | Soybean | cytosol, nucleus, plastid | 53.74 | 55.24 |
| OQU77568 | Sorghum | nucleus | 56.46 | 54.97 |
| KRH23400 | Soybean | nucleus | 55.1 | 54.0 |
| PGSC0003DMT400077451 | Potato | cytosol, nucleus, plastid | 48.3 | 52.21 |
| Solyc08g066350.1.1 | Tomato | cytosol, mitochondrion, nucleus | 46.94 | 50.74 |
| Solyc11g070150.1.1 | Tomato | nucleus | 46.94 | 50.37 |
| Zm00001d037694_P001 | Maize | cytosol | 60.54 | 50.0 |
| PGSC0003DMT400047799 | Potato | nucleus | 45.58 | 48.91 |
| KRH52794 | Soybean | cytosol, nucleus, plastid | 46.94 | 48.25 |
| Bra001629.1-P | Field mustard | cytosol | 44.22 | 47.79 |
| HORVU1Hr1G027980.32 | Barley | mitochondrion | 58.5 | 47.78 |
| KRH44276 | Soybean | nucleus | 52.38 | 47.24 |
| VIT_04s0008g00210.t01 | Wine grape | mitochondrion | 55.78 | 44.32 |
| TraesCS1A01G122300.1 | Wheat | nucleus | 46.26 | 42.24 |
| TraesCS1D01G123300.1 | Wheat | nucleus | 46.26 | 42.24 |
| GSMUA_Achr11P... | Banana | cytosol | 40.82 | 39.74 |
| GSMUA_Achr11P... | Banana | extracellular | 39.46 | 38.93 |
| GSMUA_Achr10P... | Banana | extracellular | 37.41 | 36.91 |
| GSMUA_Achr8P07680_001 | Banana | extracellular | 36.73 | 36.24 |
| GSMUA_AchrUn_... | Banana | cytosol | 35.37 | 34.21 |
| GSMUA_Achr7P14620_001 | Banana | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 35.37 | 34.21 |
| GSMUA_Achr7P14570_001 | Banana | cytosol | 35.37 | 34.21 |
| KRH74260 | Soybean | cytosol | 34.01 | 32.26 |
| PGSC0003DMT400094075 | Potato | nucleus | 34.69 | 25.12 |
| VIT_11s0016g03170.t01 | Wine grape | cytosol | 34.69 | 23.83 |
Protein Annotations
| Gene3D:1.20.120.160 | MapMan:11.4.2.2 | GO:GO:0000160 | GO:GO:0003674 | GO:GO:0004871 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 | GO:GO:0009987 |
| EnsemblPlantsGene:GSMUA_Achr9G16250_001 | EnsemblPlants:GSMUA_Achr9P16250_001 | EnsemblPlants:GSMUA_Achr9T16250_001 | InterPro:HPT_dom_sf | InterPro:IPR008207 | InterPro:IPR036641 |
| UniProt:M0U0T2 | PFAM:PF01627 | PFscan:PS50894 | PANTHER:PTHR28242 | PANTHER:PTHR28242:SF11 | SUPFAM:SSF47226 |
| InterPro:Sig_transdc_His_kin_Hpt_dom | UniParc:UPI0002966B6D | SEG:seg | : | : | : |
Description
Histidine-containing phosphotransfer protein 4 [Source:GMGC_GENE;Acc:GSMUA_Achr9G16250_001]
Coordinates
chr9:-:10951597..10952377
Molecular Weight (calculated)
16960.0 Da
IEP (calculated)
5.704
GRAVY (calculated)
-0.514
Length
147 amino acids
Sequence
(BLAST)
(BLAST)
001: MFTYTTSVYR FSLVLQGYLD EQFDQLEELQ DESSPNFVEE VVTLFFRDSS RLMANIDDAL QQCPRDFHRL DNFLHRLKGS ASSIGAAKMK NECTSFREFC
101: SEGNLDGCLR SFQKVKNDHT ILRQKLENYL QLLRQVGPVD KASRSGS
101: SEGNLDGCLR SFQKVKNDHT ILRQKLENYL QLLRQVGPVD KASRSGS
001: MQRQVALIKQ SLFDQGYLDE QFMELEELQD DANPNFVEEV SALYFKDSAR LINNIDQALE RGSFDFNRLD SYMHQFKGSS TSIGASKVKA ECTTFREYCR
101: AGNAEGCLRT FQQLKKEHST LRKKLEHYFQ LARQAGPKET ARRPK
101: AGNAEGCLRT FQQLKKEHST LRKKLEHYFQ LARQAGPKET ARRPK
Arabidopsis Description
AHP4AHP4 [Source:UniProtKB/TrEMBL;Acc:A0A178V965]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.