Factsheet for Solyc11g070150.1.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400047799	Potato	nucleus	95.62	95.62
Solyc08g066350.1.1	Tomato	cytosol, mitochondrion, nucleus	69.34	69.85
KRH52794	Soybean	cytosol, nucleus, plastid	56.93	54.55
GSMUA_Achr11P...	Banana	nucleus	59.85	53.95
Os01t0743800-00	Rice	cytosol, nucleus, plastid	57.66	52.32
Os05t0186100-01	Rice	nucleus	56.93	51.66
GSMUA_Achr10P...	Banana	nucleus	56.2	50.99
TraesCS1B01G141500.1	Wheat	nucleus	56.2	50.99
TraesCS1D01G343900.1	Wheat	cytosol, mitochondrion, nucleus, plastid	56.2	50.66
TraesCS1A01G341600.1	Wheat	cytosol, mitochondrion, nucleus, plastid	56.2	50.66
TraesCS1B01G354300.1	Wheat	cytosol, mitochondrion, nucleus, plastid	56.2	50.66
OQU77568	Sorghum	nucleus	55.47	50.33
VIT_04s0008g00210.t01	Wine grape	mitochondrion	67.15	49.73
HORVU3Hr1G070880.7	Barley	cytosol	53.28	48.03
TraesCS3B01G309100.1	Wheat	cytosol	52.55	47.68
TraesCS3D01G275300.1	Wheat	cytosol	51.82	47.02
GSMUA_Achr9P16250_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	50.37	46.94
Zm00001d037694_P001	Maize	cytosol	59.85	46.07
EES19834	Sorghum	cytosol, nucleus, plastid	51.09	45.45
Solyc01g098400.2.1	Tomato	cytosol, nucleus, plastid	48.91	45.27
HORVU1Hr1G027980.32	Barley	mitochondrion	56.2	42.78
Zm00001d043505_P001	Maize	cytosol	55.47	42.7
Solyc06g084410.2.1	Tomato	cytosol	37.23	42.5
Solyc01g080540.2.1	Tomato	cytosol, nucleus, plastid	45.99	41.72
TraesCS1D01G123300.1	Wheat	nucleus	45.99	39.13
TraesCS1A01G122300.1	Wheat	nucleus	45.99	39.13
Zm00001d010791_P001	Maize	mitochondrion	48.18	38.6
OQU87518	Sorghum	cytosol	51.09	37.23
Solyc03g116720.1.1	Tomato	cytosol	29.93	35.65
TraesCS3A01G275400.2	Wheat	extracellular, mitochondrion	46.72	35.36
HORVU1Hr1G075830.31	Barley	cytosol, mitochondrion, plastid	45.99	29.17

Protein Annotations

Gene3D:1.20.120.160	MapMan:11.4.2.2	GO:GO:0000160	GO:GO:0003674	GO:GO:0003824	GO:GO:0004871
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0005737	GO:GO:0006464	GO:GO:0006468	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150
GO:GO:0008152	GO:GO:0009719	GO:GO:0009736	GO:GO:0009927	GO:GO:0009987	GO:GO:0016301
GO:GO:0016310	GO:GO:0016740	GO:GO:0019538	GO:GO:0043424	InterPro:HPT_dom_sf	InterPro:IPR008207
InterPro:IPR036641	UniProt:K4DAH1	PFAM:PF01627	PFscan:PS50894	PANTHER:PTHR28242	PANTHER:PTHR28242:SF4
SUPFAM:SSF47226	InterPro:Sig_transdc_His_kin_Hpt_dom	EnsemblPlantsGene:Solyc11g070150.1	EnsemblPlants:Solyc11g070150.1.1	UniParc:UPI0002769555	:

Description

No Description!

Coordinates

chr11:-:54668129..54670734

Molecular Weight (calculated)

16241.2 Da

IEP (calculated)

7.180

GRAVY (calculated)

-0.812

Length

137 amino acids

Sequence
(BLAST)

001: MENQKKRQAA YMKRSLLDQG YLDEQFIHLE ELQDDANPNF VEEVVKLFYT DSARYVRNIE LALENGPYDF ARLDNMMYQF KGSSSSIGAR RVKRQCSQFQ
101: EYCNAKNIDG CRNIFQGVKQ EYATLKTKLE TYFQMER

Best Arabidopsis Sequence Match ( AT3G16360.2 )
(BLAST)

001: MQRQVALIKQ SLFDQGYLDE QFMELEELQD DANPNFVEEV SALYFKDSAR LINNIDQALE RGSFDFNRLD SYMHQFKGSS TSIGASKVKA ECTTFREYCR
101: AGNAEGCLRT FQQLKKEHST LRKKLEHYFQ LARQAGPKET ARRPK

Arabidopsis Description

AHP4AHP4 [Source:UniProtKB/TrEMBL;Acc:A0A178V965]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.