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Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid, nucleus, cytosol

Predictor Summary:
  • nucleus 3
  • cytosol 1
  • mitochondrion 1
  • plastid 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
HORVU3Hr1G070880.7 Barley cytosol 91.39 90.79
TraesCS3B01G309100.1 Wheat cytosol 88.74 88.74
TraesCS3D01G275300.1 Wheat cytosol 88.08 88.08
Zm00001d043505_P001 Maize cytosol 89.4 75.84
Os05t0186100-01 Rice nucleus 68.87 68.87
KRH47212 Soybean cytosol, nucleus, plastid 62.91 66.43
OQU87518 Sorghum cytosol 82.12 65.96
TraesCS3A01G275400.2 Wheat extracellular, mitochondrion 78.81 65.75
CDX82406 Canola cytosol 57.62 65.41
CDX75878 Canola cytosol 56.95 64.66
AT3G16360.2 Thale cress nucleus 60.93 63.45
CDY30166 Canola cytosol 55.63 63.16
KRH09934 Soybean nucleus 60.93 61.33
KRH23400 Soybean nucleus 60.93 61.33
CDY56195 Canola cytosol, nucleus, plastid 50.33 61.29
Bra027169.1-P Field mustard cytosol, nucleus, plastid 50.33 61.29
VIT_09s0002g03520.t01 Wine grape nucleus 59.6 60.0
Solyc11g070150.1.1 Tomato nucleus 52.32 57.66
PGSC0003DMT400047799 Potato nucleus 51.66 56.93
PGSC0003DMT400077451 Potato cytosol, nucleus, plastid 50.99 56.62
KRH44276 Soybean nucleus 60.26 55.83
Solyc08g066350.1.1 Tomato cytosol, mitochondrion, nucleus 49.67 55.15
Bra001629.1-P Field mustard cytosol 49.01 54.41
KRH52794 Soybean cytosol, nucleus, plastid 50.33 53.15
VIT_04s0008g00210.t01 Wine grape mitochondrion 61.59 50.27
Os08t0557700-01 Rice cytosol, plastid 37.75 38.78
Os09t0567400-01 Rice cytosol 37.75 38.26
KRH74260 Soybean cytosol 38.41 37.42
VIT_11s0016g03170.t01 Wine grape cytosol 41.06 28.97
PGSC0003DMT400094075 Potato nucleus 35.76 26.6
Protein Annotations
Gene3D:1.20.120.160MapMan:11.4.2.2EntrezGene:4326166UniProt:A0A0P0V814ProteinID:BAS74300.1GO:GO:0000160
GO:GO:0003674GO:GO:0003824GO:GO:0004871GO:GO:0005488GO:GO:0005515GO:GO:0005575
GO:GO:0005622GO:GO:0005623GO:GO:0005634GO:GO:0005737GO:GO:0007154GO:GO:0007165
GO:GO:0008150GO:GO:0008152GO:GO:0009719GO:GO:0009736GO:GO:0009927GO:GO:0009987
GO:GO:0016020GO:GO:0016021GO:GO:0016301GO:GO:0016310GO:GO:0016740GO:GO:0043424
InterPro:HPT_dom_sfInterPro:IPR008207InterPro:IPR036641EnsemblPlantsGene:Os01g0743800EnsemblPlants:Os01t0743800-00PFAM:PF01627
PANTHER:PTHR28242PANTHER:PTHR28242:SF3SUPFAM:SSF47226InterPro:Sig_transdc_His_kin_Hpt_domUniParc:UPI0001C7EE77RefSeq:XP_015621909.1
Description
PSEUDO-PHOSPHOTRANSFER PROTEIN 1Similar to histidine-containing phosphotransfer protein 4. (Os01t0743800-00)
Coordinates
chr1:+:31093047..31094953
Molecular Weight (calculated)
17394.7 Da
IEP (calculated)
7.823
GRAVY (calculated)
-0.665
Length
151 amino acids
Sequence
(BLAST)
001: MDYSNLRRQA ASMKKSLFDQ GYLDEQFCQV EDLQDEASPN FVEEVVTLFF KDSGRLMSNI EQALEKYPRD FNRWDTYMQQ LKGSCSSIGA SRMKNECMSF
101: RDSCGQGNVE GCMRSFQKVK REHAVLRQKL ESYFQLLRQA GPAGAATRPV M
Best Arabidopsis Sequence Match ( AT3G16360.2 )
(BLAST)
001: MQRQVALIKQ SLFDQGYLDE QFMELEELQD DANPNFVEEV SALYFKDSAR LINNIDQALE RGSFDFNRLD SYMHQFKGSS TSIGASKVKA ECTTFREYCR
101: AGNAEGCLRT FQQLKKEHST LRKKLEHYFQ LARQAGPKET ARRPK
Arabidopsis Description
AHP4AHP4 [Source:UniProtKB/TrEMBL;Acc:A0A178V965]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.