CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus, cytosol

Predictor Summary:

nucleus 4
cytosol 1
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH68619	Soybean	cytosol, nucleus, plastid	92.76	94.0
KRH33995	Soybean	cytosol	76.97	80.14
Solyc01g098400.2.1	Tomato	cytosol, nucleus, plastid	68.42	70.27
VIT_14s0030g00410.t01	Wine grape	cytosol	69.08	70.0
PGSC0003DMT400073603	Potato	cytosol	67.11	68.92
KRG92807	Soybean	cytosol	76.32	63.39
KRH50948	Soybean	cytosol	64.47	63.23
GSMUA_Achr11P...	Banana	cytosol	62.5	62.91
KRH11296	Soybean	cytosol	63.82	62.58
KRH20965	Soybean	cytosol	63.82	62.58
KRH67127	Soybean	cytosol	33.55	57.95
KRG95451	Soybean	cytosol	46.71	54.2
GSMUA_AchrUn_...	Banana	cytosol	53.29	53.29
GSMUA_Achr7P14620_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	52.63	52.63
GSMUA_Achr7P14570_001	Banana	cytosol	52.63	52.63
KRH31957	Soybean	cytosol	51.32	51.32
KRH71497	Soybean	cytosol, mitochondrion, nucleus	51.32	51.32
KRH47212	Soybean	cytosol, nucleus, plastid	40.79	43.36
KRH44466	Soybean	extracellular	44.08	42.95
KRH47442	Soybean	extracellular	44.08	42.95
KRH52794	Soybean	cytosol, nucleus, plastid	40.13	42.66
KRH09720	Soybean	extracellular	42.11	41.56
KRH09934	Soybean	nucleus	40.13	40.67
KRH23400	Soybean	nucleus	39.47	40.0
KRH44276	Soybean	nucleus	38.82	36.2
KRH74260	Soybean	cytosol	30.26	29.68
KRH30489	Soybean	cytosol	28.29	28.48

Protein Annotations

Gene3D:1.20.120.160	EntrezGene:100817681	MapMan:11.4.2.2	EMBL:ACUP02012168	EnsemblPlantsGene:GLYMA_19G239100	GO:GO:0000160
GO:GO:0003674	GO:GO:0003824	GO:GO:0004871	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005737	GO:GO:0006464	GO:GO:0006468
GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008152	GO:GO:0009719	GO:GO:0009736
GO:GO:0009927	GO:GO:0009987	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	GO:GO:0019538
GO:GO:0043424	InterPro:HPT_dom_sf	InterPro:IPR008207	InterPro:IPR036641	UniProt:K7N005	EnsemblPlants:KRG96886
ProteinID:KRG96886	ProteinID:KRG96886.1	PFAM:PF01627	PFscan:PS50894	PANTHER:PTHR28242	PANTHER:PTHR28242:SF24
SUPFAM:SSF47226	InterPro:Sig_transdc_His_kin_Hpt_dom	UniParc:UPI000233EA1C	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr19:+:48755659..48759162

Molecular Weight (calculated)

17283.6 Da

IEP (calculated)

4.548

GRAVY (calculated)

-0.315

Length

152 amino acids

Sequence
(BLAST)

001: MYGVSRLQRQ LAEYTSSLFE EGFLDDQFNQ LQQLQDESNP EFVVEVVTLF FEDAERLLNE LAKALGQESI DFKRVEAHVR QLKGSSSSIG AQRVQKVCIA
101: FRNYCEEKNV EGCLKNLQEI KLECSLVKSK FETLFKMEQQ LFAAGGGLLG SE

Best Arabidopsis Sequence Match ( AT1G03430.1 )
(BLAST)

001: MNTIVVAQLQ RQFQDYIVSL YQQGFLDNQF SELRKLQDEG TPDFVAEVVS LFFDDCSKLI NTMSISLERP DNVDFKQVDS GVHQLKGSSS SVGARRVKNV
101: CISFKECCDV QNREGCLRCL QQVDYEYKML KTKLQDLFNL EKQILQAGGT IPQVDIN

Arabidopsis Description

AHP5histidine-containing phosphotransfer factor 5 [Source:TAIR;Acc:AT1G03430]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.