CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH68619	Soybean	cytosol, nucleus, plastid	80.14	78.0
KRG92807	Soybean	cytosol	96.58	77.05
KRG96886	Soybean	cytosol, nucleus, plastid	80.14	76.97
VIT_14s0030g00410.t01	Wine grape	cytosol	78.08	76.0
Solyc01g098400.2.1	Tomato	cytosol, nucleus, plastid	73.97	72.97
PGSC0003DMT400073603	Potato	cytosol	72.6	71.62
KRH11296	Soybean	cytosol	72.6	68.39
KRH20965	Soybean	cytosol	72.6	68.39
KRH50948	Soybean	cytosol	72.6	68.39
GSMUA_Achr11P...	Banana	cytosol	69.86	67.55
KRH67127	Soybean	cytosol	34.93	57.95
KRG95451	Soybean	cytosol	51.37	57.25
KRH31957	Soybean	cytosol	58.22	55.92
KRH71497	Soybean	cytosol, mitochondrion, nucleus	57.53	55.26
GSMUA_Achr7P14570_001	Banana	cytosol	57.53	55.26
GSMUA_AchrUn_...	Banana	cytosol	55.48	53.29
GSMUA_Achr7P14620_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	55.48	53.29
KRH47212	Soybean	cytosol, nucleus, plastid	45.89	46.85
KRH09934	Soybean	nucleus	45.89	44.67
KRH44466	Soybean	extracellular	47.26	44.23
KRH47442	Soybean	extracellular	47.26	44.23
KRH23400	Soybean	nucleus	45.21	44.0
KRH09720	Soybean	extracellular	45.21	42.86
KRH52794	Soybean	cytosol, nucleus, plastid	41.78	42.66
KRH44276	Soybean	nucleus	43.84	39.26
KRH74260	Soybean	cytosol	33.56	31.61
KRH30489	Soybean	cytosol	29.45	28.48

Protein Annotations

Gene3D:1.20.120.160	EntrezGene:100306665	MapMan:11.4.2.2	EMBL:ACUP02006567	EMBL:BT090885	UniProt:C6T0D1
EnsemblPlantsGene:GLYMA_10G157800	GO:GO:0000160	GO:GO:0003674	GO:GO:0003824	GO:GO:0004871	GO:GO:0005488
GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005737
GO:GO:0006464	GO:GO:0006468	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008152
GO:GO:0009719	GO:GO:0009736	GO:GO:0009927	GO:GO:0009987	GO:GO:0016301	GO:GO:0016310
GO:GO:0016740	GO:GO:0019538	GO:GO:0043424	InterPro:HPT_dom_sf	InterPro:IPR008207	InterPro:IPR036641
EnsemblPlants:KRH33995	ProteinID:KRH33995	ProteinID:KRH33995.1	PFAM:PF01627	PFscan:PS50894	PANTHER:PTHR28242
PANTHER:PTHR28242:SF24	SUPFAM:SSF47226	InterPro:Sig_transdc_His_kin_Hpt_dom	UniParc:UPI0001B153A5	SEG:seg	:

Description

hypothetical protein

Coordinates

chr10:+:39191358..39192971

Molecular Weight (calculated)

16688.8 Da

IEP (calculated)

4.797

GRAVY (calculated)

-0.371

Length

146 amino acids

Sequence
(BLAST)

001: MDGIVQLQRQ LVDYTASLFH EGFLDDQFNQ LQQLQDESNP DFVVEVVTLF FEDAERLLNE LTKTLGQPSI DFKRLDAHVH QLKGSSSSIG AQRIHRVCIS
101: FRNSCEEQNV EGCLKNLQQV KQEYSLVKSK LETLFRMEQQ ILAAGG

Best Arabidopsis Sequence Match ( AT1G03430.1 )
(BLAST)

001: MNTIVVAQLQ RQFQDYIVSL YQQGFLDNQF SELRKLQDEG TPDFVAEVVS LFFDDCSKLI NTMSISLERP DNVDFKQVDS GVHQLKGSSS SVGARRVKNV
101: CISFKECCDV QNREGCLRCL QQVDYEYKML KTKLQDLFNL EKQILQAGGT IPQVDIN

Arabidopsis Description

AHP5histidine-containing phosphotransfer factor 5 [Source:TAIR;Acc:AT1G03430]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.