Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH11296 | Soybean | cytosol | 98.06 | 98.06 |
| KRH50948 | Soybean | cytosol | 85.16 | 85.16 |
| VIT_05s0020g02210.t01 | Wine grape | cytosol | 78.06 | 79.61 |
| Solyc01g080540.2.1 | Tomato | cytosol, nucleus, plastid | 75.48 | 77.48 |
| PGSC0003DMT400081747 | Potato | cytosol, nucleus, plastid | 74.84 | 76.82 |
| AT3G21510.1 | Thale cress | cytosol, nucleus, plastid | 73.55 | 74.03 |
| Bra023876.1-P | Field mustard | cytosol, nucleus, plastid | 72.26 | 72.73 |
| CDY19286 | Canola | cytosol | 72.26 | 72.73 |
| CDY37282 | Canola | cytosol, nucleus, plastid | 72.26 | 72.73 |
| KRH33995 | Soybean | cytosol | 68.39 | 72.6 |
| GSMUA_Achr11P... | Banana | cytosol | 68.39 | 70.2 |
| KRH68619 | Soybean | cytosol, nucleus, plastid | 63.87 | 66.0 |
| KRG96886 | Soybean | cytosol, nucleus, plastid | 62.58 | 63.82 |
| KRH31957 | Soybean | cytosol | 56.77 | 57.89 |
| KRG92807 | Soybean | cytosol | 67.74 | 57.38 |
| KRH71497 | Soybean | cytosol, mitochondrion, nucleus | 56.13 | 57.24 |
| KRG95451 | Soybean | cytosol | 47.74 | 56.49 |
| GSMUA_Achr7P14570_001 | Banana | cytosol | 54.19 | 55.26 |
| KRH67127 | Soybean | cytosol | 29.68 | 52.27 |
| GSMUA_Achr7P14620_001 | Banana | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 50.97 | 51.97 |
| GSMUA_AchrUn_... | Banana | cytosol | 50.32 | 51.32 |
| KRH47212 | Soybean | cytosol, nucleus, plastid | 44.52 | 48.25 |
| KRH44466 | Soybean | extracellular | 45.81 | 45.51 |
| KRH47442 | Soybean | extracellular | 45.81 | 45.51 |
| KRH52794 | Soybean | cytosol, nucleus, plastid | 41.94 | 45.45 |
| KRH23400 | Soybean | nucleus | 43.87 | 45.33 |
| KRH09934 | Soybean | nucleus | 43.87 | 45.33 |
| KRH09720 | Soybean | extracellular | 43.87 | 44.16 |
| KRH44276 | Soybean | nucleus | 42.58 | 40.49 |
| KRH74260 | Soybean | cytosol | 33.55 | 33.55 |
| KRH30489 | Soybean | cytosol | 23.23 | 23.84 |
Protein Annotations
| Gene3D:1.20.120.160 | EntrezGene:100306589 | MapMan:11.4.2.2 | EMBL:ACUP02008332 | EMBL:BT090771 | UniProt:C6T018 |
| EnsemblPlantsGene:GLYMA_13G212800 | GO:GO:0000160 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004871 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005737 |
| GO:GO:0006464 | GO:GO:0006468 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009719 | GO:GO:0009736 | GO:GO:0009927 | GO:GO:0009987 | GO:GO:0016301 | GO:GO:0016310 |
| GO:GO:0016740 | GO:GO:0019538 | GO:GO:0043424 | InterPro:HPT_dom_sf | InterPro:IPR008207 | InterPro:IPR036641 |
| ProteinID:KRH20964.1 | EnsemblPlants:KRH20965 | ProteinID:KRH20965 | ProteinID:KRH20965.1 | PFAM:PF01627 | PFscan:PS50894 |
| PANTHER:PTHR28242 | PANTHER:PTHR28242:SF5 | SUPFAM:SSF47226 | InterPro:Sig_transdc_His_kin_Hpt_dom | UniParc:UPI0001B15252 | SEG:seg |
Description
hypothetical protein
Coordinates
chr13:+:32634204..32636454
Molecular Weight (calculated)
17706.1 Da
IEP (calculated)
4.547
GRAVY (calculated)
-0.244
Length
155 amino acids
Sequence
(BLAST)
(BLAST)
001: MDVGQMQRQW IDYTKSLFLE GFLDGQFLQL QQLQDENNPD FVVEVVSLFF EDSERLLKDL TFALDQNGVD FKKVDAHVHQ LKGSSSSIGA QRVKNACIAF
101: RNFCEEQNTD ACLRCLQQVK QEYCIVKNKL ETMFRLEQQI VAAGGSIPTE LSFIG
101: RNFCEEQNTD ACLRCLQQVK QEYCIVKNKL ETMFRLEQQI VAAGGSIPTE LSFIG
001: MDLVQKQKSL QDYTKSLFLE GILDSQFLQL QQLQDESNPD FVSQVVTLFF QDSDRILNDL SLSLDQQVVD FKKVDPHVHQ LKGSSSSIGA QRVKNACVVF
101: RSFCEQQNVE ACHRCLQQVK QEYYLVKNRL ETLFKLEQQI VASGGMIPAV ELGF
101: RSFCEQQNVE ACHRCLQQVK QEYYLVKNRL ETLFKLEQQI VASGGMIPAV ELGF
Arabidopsis Description
AHP1AHP1 [Source:UniProtKB/TrEMBL;Acc:A0A178V856]
SUBAcon: [plastid,nucleus,cytosol]
SUBAcon: [plastid,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.