Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH54462 | Soybean | cytosol | 94.12 | 94.12 |
| KRH03376 | Soybean | nucleus | 72.55 | 71.5 |
| KRH57009 | Soybean | nucleus | 72.06 | 69.67 |
| Solyc03g113720.2.1 | Tomato | nucleus | 61.27 | 64.1 |
| PGSC0003DMT400063187 | Potato | cytosol | 60.78 | 62.0 |
| AT3G48100.1 | Thale cress | cytosol | 55.39 | 61.41 |
| Bra033773.1-P | Field mustard | nucleus | 53.92 | 61.11 |
| KRH53721 | Soybean | cytosol | 40.69 | 61.03 |
| AT5G62920.1 | Thale cress | cytosol | 55.39 | 60.75 |
| CDY54257 | Canola | cytosol, nucleus, peroxisome | 54.41 | 60.66 |
| Bra018084.1-P | Field mustard | cytosol, nucleus, plastid | 52.94 | 60.34 |
| CDY68129 | Canola | cytosol, nucleus, plastid | 52.94 | 60.34 |
| CDX73122 | Canola | cytosol, golgi, nucleus | 51.96 | 59.89 |
| CDY70164 | Canola | nucleus | 53.43 | 59.56 |
| CDY59856 | Canola | cytosol, nucleus, peroxisome | 53.43 | 59.56 |
| CDY36905 | Canola | nucleus | 53.43 | 59.56 |
| CDY21807 | Canola | cytosol, nucleus, peroxisome | 53.43 | 59.24 |
| CDY45402 | Canola | cytosol, golgi, peroxisome | 52.94 | 58.7 |
| Bra015885.1-P | Field mustard | cytosol, golgi, peroxisome | 52.94 | 58.38 |
| KRH64213 | Soybean | cytosol | 41.67 | 58.22 |
| Bra010132.1-P | Field mustard | nucleus | 53.92 | 57.89 |
| CDX84366 | Canola | nucleus | 53.92 | 57.89 |
| CDY00336 | Canola | nucleus | 53.92 | 57.89 |
| AT1G74890.1 | Thale cress | nucleus | 56.86 | 56.31 |
| AT1G19050.1 | Thale cress | cytosol | 55.88 | 55.34 |
| Bra003782.1-P | Field mustard | cytosol | 53.43 | 55.33 |
| CDX68161 | Canola | cytosol | 53.43 | 55.33 |
| CDX96681 | Canola | cytosol | 55.39 | 54.59 |
| Bra016526.1-P | Field mustard | cytosol | 55.39 | 54.59 |
| CDX83788 | Canola | cytosol | 55.88 | 53.77 |
| CDY26701 | Canola | nucleus | 54.9 | 52.58 |
| Bra025708.1-P | Field mustard | nucleus | 54.9 | 52.58 |
| CDY41014 | Canola | nucleus | 54.9 | 52.34 |
| VIT_17s0000g07580.t01 | Wine grape | cytosol, nucleus, plastid | 65.69 | 51.94 |
| CDX85860 | Canola | endoplasmic reticulum, golgi, vacuole | 51.96 | 48.62 |
| Bra019524.1-P | Field mustard | cytosol | 31.86 | 48.51 |
| KRH45761 | Soybean | nucleus | 51.96 | 47.53 |
| KRG99225 | Soybean | nucleus | 50.98 | 46.85 |
| KRH13391 | Soybean | nucleus | 40.2 | 45.81 |
| KRH30056 | Soybean | nucleus | 41.67 | 45.45 |
| KRH69443 | Soybean | nucleus | 53.43 | 45.42 |
| KRH20737 | Soybean | nucleus | 39.71 | 45.25 |
| KRH74701 | Soybean | nucleus | 53.92 | 45.08 |
| KRH62857 | Soybean | nucleus | 39.71 | 43.78 |
| KRH18706 | Soybean | nucleus | 38.73 | 37.09 |
| KRH64643 | Soybean | nucleus | 42.65 | 37.02 |
| KRH53261 | Soybean | nucleus | 41.18 | 36.21 |
| KRH66808 | Soybean | nucleus | 43.14 | 35.48 |
| KRG95133 | Soybean | nucleus | 42.65 | 35.37 |
Protein Annotations
| EntrezGene:100306152 | MapMan:11.4.2.5 | Gene3D:3.40.50.2300 | EMBL:ACUP02002694 | InterPro:CheY-like_superfamily | EnsemblPlantsGene:GLYMA_04G177900 |
| GO:GO:0000160 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0007154 | GO:GO:0007165 |
| GO:GO:0008150 | GO:GO:0009987 | UniProt:I1JX19 | InterPro:IPR001789 | EnsemblPlants:KRH63457 | ProteinID:KRH63457 |
| ProteinID:KRH63457.1 | PFAM:PF00072 | PFscan:PS50110 | PANTHER:PTHR43874 | PANTHER:PTHR43874:SF36 | SMART:SM00448 |
| SUPFAM:SSF52172 | InterPro:Sig_transdc_resp-reg_receiver | UniParc:UPI00023C04E4 | : | : | : |
Description
hypothetical protein
Coordinates
chr4:-:44209619..44212193
Molecular Weight (calculated)
22221.1 Da
IEP (calculated)
8.369
GRAVY (calculated)
-0.055
Length
204 amino acids
Sequence
(BLAST)
(BLAST)
001: MASAGDVFRQ GLPEVCAAGK LHVLAVDDSH VDRKVIERLL KISSCKVTVV ESGSRALQYL GLDGEKSSIG LDSVKVNLIM TDYSMPGMTG YELLKKIKES
101: SVFREVPVVV MSSENILTRI DSCLEEGAEE FLLKPVKLSD VKRVTDFIMR GEGMKGVKIS KKRSRSDDCI PSLSTAFSSV SHPCDISSPP SPCVLQPKKS
201: RLSI
101: SVFREVPVVV MSSENILTRI DSCLEEGAEE FLLKPVKLSD VKRVTDFIMR GEGMKGVKIS KKRSRSDDCI PSLSTAFSSV SHPCDISSPP SPCVLQPKKS
201: RLSI
001: MAEVMLPRKM EILNHSSKFG SPDPLHVLAV DDSHVDRKFI ERLLRVSSCK VTVVDSATRA LQYLGLDVEE KSVGFEDLKV NLIMTDYSMP GMTGYELLKK
101: IKESSAFREV PVVIMSSENI LPRIDRCLEE GAEDFLLKPV KLSDVKRLRD SLMKVEDLSF TKSIQKRELE TENVYPVHSQ LKRAKI
101: IKESSAFREV PVVIMSSENI LPRIDRCLEE GAEDFLLKPV KLSDVKRLRD SLMKVEDLSF TKSIQKRELE TENVYPVHSQ LKRAKI
Arabidopsis Description
ARR6Response regulator 6 [Source:UniProtKB/TrEMBL;Acc:Q0WSS6]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.