CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
BaCelLo:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
KRH03376
KRH54462
KRH57009
KRH63457

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G46430.1	KRH03376	AT3G48100.1	18642946
AT5G46430.1	KRH54462	AT3G48100.1	18642946
AT5G46430.1	KRH57009	AT3G48100.1	18642946
AT5G46430.1	KRH63457	AT3G48100.1	18642946

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH12802	Soybean	cytosol	73.83	59.4
KRH18320	Soybean	endoplasmic reticulum	73.83	59.4
KRH58920	Soybean	cytosol, plastid	72.9	58.65
KRH67946	Soybean	endoplasmic reticulum	72.9	58.65
KRH42824	Soybean	cytosol, plastid	72.9	58.65
KRH31095	Soybean	nucleus	72.9	58.65
KRH42825	Soybean	nucleus	71.96	57.89
VIT_10s0003g02650.t01	Wine grape	cytosol, plastid	71.03	57.14
TraesCS7B01G152300.1	Wheat	cytosol, mitochondrion	71.03	56.72
TraesCS5A01G279100.1	Wheat	golgi	70.09	56.39
TraesCS7B01G152900.1	Wheat	golgi, unclear	70.09	56.39
EER97002	Sorghum	cytosol	70.09	56.39
Os09t0501200-01	Rice	nucleus	70.09	56.39
GSMUA_Achr3P02470_001	Banana	cytosol, mitochondrion, nucleus, plastid	70.09	56.39
TraesCS7A01G255800.1	Wheat	cytosol, mitochondrion	69.16	55.64
TraesCS5D01G286400.1	Wheat	cytosol	69.16	55.64
TraesCS5B01G278700.1	Wheat	cytosol	69.16	55.64
TraesCS5A01G279400.1	Wheat	unclear	69.16	55.64
PGSC0003DMT400022579	Potato	cytosol	69.16	55.64
Os09t0502000-01	Rice	nucleus	69.16	55.64
Zm00001d021020_P001	Maize	mitochondrion, plastid	69.16	55.64
Zm00001d006064_P002	Maize	cytosol	69.16	55.22
Solyc02g070310.2.1	Tomato	nucleus, plastid	68.22	54.89
PGSC0003DMT400005838	Potato	cytosol	68.22	54.89
Zm00001d049790_P007	Maize	cytosol	68.22	54.89
Solyc08g006900.2.1	Tomato	nucleus	68.22	54.89
AT4G18100.1	Thale cress	cytosol	68.22	54.89
CDY61673	Canola	cytosol	68.22	54.89
CDX78825	Canola	cytosol	68.22	54.89
CDX90420	Canola	cytosol	68.22	54.89
CDX77662	Canola	cytosol	68.22	54.89
CDY01520	Canola	extracellular	68.22	54.89
CDY03219	Canola	cytosol	68.22	54.89
CDY08886	Canola	cytosol	68.22	54.89
CDY33476	Canola	cytosol	68.22	54.89
CDX76545	Canola	cytosol	68.22	54.89
Bra021023.1-P	Field mustard	cytosol	68.22	54.89
CDY35163	Canola	cytosol	68.22	54.89
EER99136	Sorghum	cytosol	68.22	54.89
EES15331	Sorghum	cytosol	68.22	54.89
GSMUA_Achr10P...	Banana	cytosol	68.22	54.89
Bra013284.1-P	Field mustard	cytosol	68.22	54.89
GSMUA_Achr7P19740_001	Banana	cytosol	68.22	54.89
Bra012616.1-P	Field mustard	cytosol	68.22	54.89
HORVU7Hr1G052800.8	Barley	cytosol	68.22	54.89
Os08t0524600-00	Rice	cytosol, endoplasmic reticulum	21.5	54.76
Bra017545.1-P	Field mustard	cytosol	67.29	54.14
AT5G46430.1	Thale cress	cytosol	66.36	53.38
TraesCS7D01G254200.1	Wheat	cytosol, mitochondrion	71.03	51.35
HORVU5Hr1G075500.3	Barley	cytosol	69.16	50.34
HORVU5Hr1G075420.2	Barley	plastid	70.09	49.02
Zm00001d021018_P002	Maize	cytosol	69.16	47.74
TraesCS7A01G256300.1	Wheat	cytosol	71.03	46.63
TraesCS7D01G257100.1	Wheat	cytosol, mitochondrion	71.03	46.63
GSMUA_Achr6P12040_001	Banana	cytosol	70.09	46.01
TraesCS5D01G286200.2	Wheat	cytosol, mitochondrion	70.09	43.1
TraesCS5B01G278500.2	Wheat	cytosol, mitochondrion	70.09	43.1
Os09t0501700-00	Rice	nucleus	68.22	42.94
PGSC0003DMT400054361	Potato	cytosol	29.91	42.11
Zm00001d031560_P001	Maize	plastid	68.22	35.61
PGSC0003DMT400035383	Potato	cytosol, mitochondrion	68.22	19.31

Protein Annotations

MapMan:17.1.2.1.33	UniProt:A0A0R0G431	EMBL:ACUP02009396	EnsemblPlantsGene:GLYMA_15G195900	GO:GO:0003674	GO:GO:0003735
GO:GO:0005198	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005829
GO:GO:0005840	GO:GO:0006412	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
GO:GO:0016020	GO:GO:0016021	GO:GO:0019538	GO:GO:0022625	EnsemblPlants:KRH12807	ProteinID:KRH12807
ProteinID:KRH12807.1	PFAM:PD003823	PFAM:PF01655	PANTHER:PTHR23413	InterPro:Ribosomal_L32e	InterPro:Ribosomal_L32e_sf
SMART:SM01393	SUPFAM:SSF52042	TMHMM:TMhelix	UniParc:UPI0006EDFF52	SEG:seg	:

Description

hypothetical protein

Coordinates

chr15:-:22430343..22430770

Molecular Weight (calculated)

12454.4 Da

IEP (calculated)

10.747

GRAVY (calculated)

-0.116

Length

107 amino acids

Sequence
(BLAST)

001: SSKGIDSRVR RKFKGCTLMP NIGYGSDKKT YHYLPNGFKK FVVHNVKDLE LLMMHNRTYC VKISHNVSTR KRKDIVERAT QLDVVVVVVI LIHFWISQLA
101: FNFLKVS

Best Arabidopsis Sequence Match ( AT4G18100.1 )
(BLAST)

001: MAVPLLTKKV VKKRSAKFIR PQSDRRITVK ESWRRPKGID SRVRRKFKGV TLMPNVGYGS DKKTRHYLPN GFKKFVVHNT SELELLMMHN RTYCAEIAHN
101: VSTKKRKAIV ERASQLDVVV TNRLARLRSQ EDE

Arabidopsis Description

RPL32A60S ribosomal protein L32-1 [Source:UniProtKB/Swiss-Prot;Acc:P49211]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.