CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 4
cytosol 3
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os08t0524600-00	Rice	cytosol, endoplasmic reticulum	30.83	97.62
EER99136	Sorghum	cytosol	96.99	96.99
EER97002	Sorghum	cytosol	96.99	96.99
TraesCS7B01G152900.1	Wheat	golgi, unclear	92.48	92.48
GSMUA_Achr3P02470_001	Banana	cytosol, mitochondrion, nucleus, plastid	88.72	88.72
GSMUA_Achr10P...	Banana	cytosol	88.72	88.72
Solyc08g006900.2.1	Tomato	nucleus	87.97	87.97
PGSC0003DMT400022579	Potato	cytosol	87.22	87.22
GSMUA_Achr7P19740_001	Banana	cytosol	87.22	87.22
VIT_10s0003g02650.t01	Wine grape	cytosol, plastid	86.47	86.47
KRH18320	Soybean	endoplasmic reticulum	84.96	84.96
KRH58920	Soybean	cytosol, plastid	84.21	84.21
KRH42824	Soybean	cytosol, plastid	84.21	84.21
KRH31095	Soybean	nucleus	84.21	84.21
KRH12802	Soybean	cytosol	84.21	84.21
KRH67946	Soybean	endoplasmic reticulum	83.46	83.46
KRH42825	Soybean	nucleus	82.71	82.71
CDY01520	Canola	extracellular	80.45	80.45
Bra012616.1-P	Field mustard	cytosol	80.45	80.45
Bra013284.1-P	Field mustard	cytosol	80.45	80.45
AT4G18100.1	Thale cress	cytosol	80.45	80.45
Bra021023.1-P	Field mustard	cytosol	80.45	80.45
CDX76545	Canola	cytosol	80.45	80.45
CDX78825	Canola	cytosol	80.45	80.45
CDY61673	Canola	cytosol	80.45	80.45
CDY35163	Canola	cytosol	80.45	80.45
CDY08886	Canola	cytosol	80.45	80.45
CDX90420	Canola	cytosol	80.45	80.45
CDX77662	Canola	cytosol	79.7	79.7
Solyc02g070310.2.1	Tomato	nucleus, plastid	79.7	79.7
CDY33476	Canola	cytosol	79.7	79.7
CDY03219	Canola	cytosol	79.7	79.7
Bra017545.1-P	Field mustard	cytosol	78.95	78.95
PGSC0003DMT400005838	Potato	cytosol	78.95	78.95
AT5G46430.1	Thale cress	cytosol	78.2	78.2
TraesCS7A01G256300.1	Wheat	cytosol	92.48	75.46
TraesCS7D01G257100.1	Wheat	cytosol, mitochondrion	91.73	74.85
PGSC0003DMT400054361	Potato	cytosol	42.11	73.68
VIT_00s0260g00080.t01	Wine grape	cytosol	73.68	72.59
GSMUA_Achr6P12040_001	Banana	cytosol	87.97	71.78
KRH12807	Soybean	cytosol	54.89	68.22
Zm00001d031560_P001	Maize	plastid	99.25	64.39
CDY35926	Canola	cytosol	36.84	39.84
CDY28057	Canola	cytosol	39.85	38.69
PGSC0003DMT400035383	Potato	cytosol, mitochondrion	78.2	27.51

Protein Annotations

MapMan:17.1.2.1.33	EntrezGene:8062414	UniProt:C5YI63	EnsemblPlants:EES15331	ProteinID:EES15331	ProteinID:EES15331.1
GO:GO:0003674	GO:GO:0003735	GO:GO:0005198	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005829	GO:GO:0005840	GO:GO:0006412	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	GO:GO:0019538	GO:GO:0022625	PFAM:PD003823	PFAM:PF01655
PANTHER:PTHR23413	InterPro:Ribosomal_L32e	InterPro:Ribosomal_L32e_sf	SMART:SM01393	EnsemblPlantsGene:SORBI_3007G197800	SUPFAM:SSF52042
unigene:Sbi.14218	UniParc:UPI0001A87850	RefSeq:XP_002445836.1	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr7:-:62932390..62934465

Molecular Weight (calculated)

15733.5 Da

IEP (calculated)

11.116

GRAVY (calculated)

-0.755

Length

133 amino acids

Sequence
(BLAST)

001: MAVPLLTKKI VKKRVKQFKR PHLDRYKCLK PSWRRPKGID SRVRRKFKGC TLMPNIGYGS DKSTRHYLPN KFKKFVVHNV SELELLMMHN RTYCAEIAHN
101: VSTKKRKEIV ERASQLDIVV TNKLARLRSQ EDE

Best Arabidopsis Sequence Match ( AT4G18100.1 )
(BLAST)

001: MAVPLLTKKV VKKRSAKFIR PQSDRRITVK ESWRRPKGID SRVRRKFKGV TLMPNVGYGS DKKTRHYLPN GFKKFVVHNT SELELLMMHN RTYCAEIAHN
101: VSTKKRKAIV ERASQLDVVV TNRLARLRSQ EDE

Arabidopsis Description

RPL32A60S ribosomal protein L32-1 [Source:UniProtKB/Swiss-Prot;Acc:P49211]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.