CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
cytosol 2
mitochondrion 2
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY35926	Canola	cytosol	59.12	65.85
Os08t0524600-00	Rice	cytosol, endoplasmic reticulum	18.98	61.9
CDX77662	Canola	cytosol	38.69	39.85
EES15331	Sorghum	cytosol	38.69	39.85
CDY33476	Canola	cytosol	38.69	39.85
CDY03219	Canola	cytosol	38.69	39.85
Os09t0502000-01	Rice	nucleus	37.96	39.1
Zm00001d049790_P007	Maize	cytosol	37.96	39.1
Zm00001d021020_P001	Maize	mitochondrion, plastid	37.96	39.1
CDX76545	Canola	cytosol	37.96	39.1
CDX78825	Canola	cytosol	37.96	39.1
CDY08886	Canola	cytosol	37.96	39.1
CDY61673	Canola	cytosol	37.96	39.1
CDY01520	Canola	extracellular	37.96	39.1
CDX90420	Canola	cytosol	37.96	39.1
CDY35163	Canola	cytosol	37.96	39.1
EER99136	Sorghum	cytosol	37.23	38.35
TraesCS7B01G152900.1	Wheat	golgi, unclear	37.23	38.35
TraesCS7A01G255800.1	Wheat	cytosol, mitochondrion	37.23	38.35
TraesCS5D01G286400.1	Wheat	cytosol	37.23	38.35
TraesCS5B01G278700.1	Wheat	cytosol	37.23	38.35
TraesCS5A01G279400.1	Wheat	unclear	37.23	38.35
TraesCS5A01G279100.1	Wheat	golgi	37.23	38.35
Os09t0501200-01	Rice	nucleus	37.23	38.35
EER97002	Sorghum	cytosol	37.23	38.35
Zm00001d006064_P002	Maize	cytosol	37.23	38.06
TraesCS7B01G152300.1	Wheat	cytosol, mitochondrion	37.23	38.06
VIT_00s0260g00080.t01	Wine grape	cytosol	36.5	37.04
GSMUA_Achr10P...	Banana	cytosol	35.04	36.09
GSMUA_Achr7P19740_001	Banana	cytosol	35.04	36.09
HORVU7Hr1G052800.8	Barley	cytosol	34.31	35.34
GSMUA_Achr3P02470_001	Banana	cytosol, mitochondrion, nucleus, plastid	34.31	35.34
HORVU5Hr1G075500.3	Barley	cytosol	37.23	34.69
TraesCS7D01G254200.1	Wheat	cytosol, mitochondrion	37.23	34.46
HORVU5Hr1G075420.2	Barley	plastid	37.23	33.33
Zm00001d021018_P002	Maize	cytosol	37.23	32.9
TraesCS7A01G256300.1	Wheat	cytosol	37.23	31.29
TraesCS7D01G257100.1	Wheat	cytosol, mitochondrion	37.23	31.29
Os09t0501700-00	Rice	nucleus	37.23	30.0
TraesCS5D01G286200.2	Wheat	cytosol, mitochondrion	37.23	29.31
TraesCS5B01G278500.2	Wheat	cytosol, mitochondrion	37.23	29.31
GSMUA_Achr6P12040_001	Banana	cytosol	34.31	28.83
Zm00001d031560_P001	Maize	plastid	37.96	25.37

Protein Annotations

MapMan:35.1	GO:A0A078GSE9	UniProt:A0A078GSE9	EnsemblPlants:CDY28057	ProteinID:CDY28057	ProteinID:CDY28057.1
GO:GO:0003674	GO:GO:0003735	GO:GO:0005198	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005840	GO:GO:0006412	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00038998001	PFAM:PD003823	PFAM:PF01655	PANTHER:PTHR23413
InterPro:Ribosomal_L32e	InterPro:Ribosomal_L32e_sf	SMART:SM01393	SUPFAM:SSF52042	UniParc:UPI0004EEB98C	:

Description

BnaC05g44590DBnaC05g44590D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GSE9]

Coordinates

chrLK032213:+:412381..413680

Molecular Weight (calculated)

16193.5 Da

IEP (calculated)

10.315

GRAVY (calculated)

-0.650

Length

137 amino acids

Sequence
(BLAST)

001: MELHESWRRP MCVDSRVQRK FKGYVLTPNS GYGSHKTPHS YYTFVTRSCL LHGSFEDGLT RREVIAHNVL ITKKRKEIVE RASQLDVVVS NRLARSEPRR
101: QVEKKRYYLL ELRSLFSSIL FWRDSTHAPT EEKIPVE

Best Arabidopsis Sequence Match ( AT4G18100.1 )
(BLAST)

001: MAVPLLTKKV VKKRSAKFIR PQSDRRITVK ESWRRPKGID SRVRRKFKGV TLMPNVGYGS DKKTRHYLPN GFKKFVVHNT SELELLMMHN RTYCAEIAHN
101: VSTKKRKAIV ERASQLDVVV TNRLARLRSQ EDE

Arabidopsis Description

RPL32A60S ribosomal protein L32-1 [Source:UniProtKB/Swiss-Prot;Acc:P49211]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.