Factsheet for HORVU5Hr1G075500.3

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid
iPSORT:	plastid
MultiLoc:	cytosol
TargetP:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5A01G279400.1	Wheat	unclear	90.48	100.0
TraesCS5B01G278700.1	Wheat	cytosol	90.48	100.0
TraesCS5D01G286400.1	Wheat	cytosol	90.48	100.0
Os09t0501200-01	Rice	nucleus	82.31	90.98
EER97002	Sorghum	cytosol	80.95	89.47
Zm00001d006064_P002	Maize	cytosol	80.27	88.06
HORVU7Hr1G052800.8	Barley	cytosol	79.59	87.97
HORVU5Hr1G075420.2	Barley	plastid	89.8	86.27
VIT_10s0003g02650.t01	Wine grape	cytosol, plastid	76.87	84.96
KRH42824	Soybean	cytosol, plastid	76.19	84.21
KRH31095	Soybean	nucleus	76.19	84.21
KRH18320	Soybean	endoplasmic reticulum	76.19	84.21
GSMUA_Achr10P...	Banana	cytosol	76.19	84.21
GSMUA_Achr3P02470_001	Banana	cytosol, mitochondrion, nucleus, plastid	76.19	84.21
KRH58920	Soybean	cytosol, plastid	76.19	84.21
KRH12802	Soybean	cytosol	76.19	84.21
GSMUA_Achr7P19740_001	Banana	cytosol	76.19	84.21
PGSC0003DMT400022579	Potato	cytosol	75.51	83.46
Solyc08g006900.2.1	Tomato	nucleus	75.51	83.46
KRH67946	Soybean	endoplasmic reticulum	75.51	83.46
KRH42825	Soybean	nucleus	74.83	82.71
Solyc02g070310.2.1	Tomato	nucleus, plastid	71.43	78.95
AT4G18100.1	Thale cress	cytosol	70.75	78.2
PGSC0003DMT400005838	Potato	cytosol	70.75	78.2
CDY61673	Canola	cytosol	69.39	76.69
CDY35163	Canola	cytosol	69.39	76.69
CDY08886	Canola	cytosol	69.39	76.69
CDY01520	Canola	extracellular	69.39	76.69
CDX90420	Canola	cytosol	69.39	76.69
CDX78825	Canola	cytosol	69.39	76.69
CDX76545	Canola	cytosol	69.39	76.69
Bra021023.1-P	Field mustard	cytosol	69.39	76.69
Bra013284.1-P	Field mustard	cytosol	69.39	76.69
Bra012616.1-P	Field mustard	cytosol	69.39	76.69
Zm00001d021018_P002	Maize	cytosol	80.27	76.13
CDY33476	Canola	cytosol	68.71	75.94
CDY03219	Canola	cytosol	68.71	75.94
CDX77662	Canola	cytosol	68.71	75.94
AT5G46430.1	Thale cress	cytosol	68.71	75.94
Bra017545.1-P	Field mustard	cytosol	68.03	75.19
VIT_00s0260g00080.t01	Wine grape	cytosol	67.35	73.33
PGSC0003DMT400054361	Potato	cytosol	37.41	72.37
KRH12807	Soybean	cytosol	50.34	69.16
GSMUA_Achr6P12040_001	Banana	cytosol	76.19	68.71
CDY35926	Canola	cytosol	31.97	38.21
CDY28057	Canola	cytosol	34.69	37.23
PGSC0003DMT400035383	Potato	cytosol, mitochondrion	70.07	27.25

Protein Annotations

MapMan:17.1.2.1.33	UniProt:A0A287RUE0	EMBL:AK376467	GO:GO:0003674	GO:GO:0003735	GO:GO:0005198
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005840	GO:GO:0006412
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0019538	EnsemblPlantsGene:HORVU5Hr1G075500
EnsemblPlants:HORVU5Hr1G075500.3	PFAM:PD003823	PFAM:PF01655	PANTHER:PTHR23413	InterPro:Ribosomal_L32e	InterPro:Ribosomal_L32e_sf
SMART:SM01393	SUPFAM:SSF52042	UniParc:UPI000B461360	SEG:seg	:	:

Description

No Description!

Coordinates

chrchr5H:+:547244561..547246475

Molecular Weight (calculated)

16990.0 Da

IEP (calculated)

11.248

GRAVY (calculated)

-0.627

Length

147 amino acids

Sequence
(BLAST)

001: LPSPPPPPPL ALQEMAVPIL KTAIVKKRVK HFKRAHSDRY IGLKQSWRRP KGIDSRVRRK FKGCTLMPNI GYGSNKKTRH YLPNKFKKFV VHNVSELELL
101: MMHNRTYCAE IAHNVSTQKR KAIVERAAQL DVVVTNKLAR LRSQEDE

Best Arabidopsis Sequence Match ( AT4G18100.1 )
(BLAST)

001: MAVPLLTKKV VKKRSAKFIR PQSDRRITVK ESWRRPKGID SRVRRKFKGV TLMPNVGYGS DKKTRHYLPN GFKKFVVHNT SELELLMMHN RTYCAEIAHN
101: VSTKKRKAIV ERASQLDVVV TNRLARLRSQ EDE

Arabidopsis Description

RPL32A60S ribosomal protein L32-1 [Source:UniProtKB/Swiss-Prot;Acc:P49211]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.