CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 3
cytosol 3
nucleus 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d006064_P002	Maize	cytosol	99.25	98.51
EER99136	Sorghum	cytosol	98.5	98.5
EES15331	Sorghum	cytosol	96.99	96.99
Os09t0501200-01	Rice	nucleus	95.49	95.49
TraesCS5A01G279100.1	Wheat	golgi	90.98	90.98
TraesCS5D01G286400.1	Wheat	cytosol	89.47	89.47
TraesCS5B01G278700.1	Wheat	cytosol	89.47	89.47
TraesCS5A01G279400.1	Wheat	unclear	89.47	89.47
GSMUA_Achr3P02470_001	Banana	cytosol, mitochondrion, nucleus, plastid	89.47	89.47
PGSC0003DMT400022579	Potato	cytosol	88.72	88.72
GSMUA_Achr10P...	Banana	cytosol	88.72	88.72
Solyc08g006900.2.1	Tomato	nucleus	87.97	87.97
VIT_10s0003g02650.t01	Wine grape	cytosol, plastid	87.97	87.97
GSMUA_Achr7P19740_001	Banana	cytosol	87.22	87.22
KRH18320	Soybean	endoplasmic reticulum	86.47	86.47
KRH12802	Soybean	cytosol	85.71	85.71
KRH58920	Soybean	cytosol, plastid	85.71	85.71
KRH42824	Soybean	cytosol, plastid	85.71	85.71
KRH31095	Soybean	nucleus	85.71	85.71
Zm00001d021018_P002	Maize	cytosol	99.25	85.16
KRH67946	Soybean	endoplasmic reticulum	84.96	84.96
KRH42825	Soybean	nucleus	84.21	84.21
Solyc02g070310.2.1	Tomato	nucleus, plastid	81.2	81.2
HORVU5Hr1G075500.3	Barley	cytosol	89.47	80.95
PGSC0003DMT400005838	Potato	cytosol	80.45	80.45
AT4G18100.1	Thale cress	cytosol	78.95	78.95
CDX78825	Canola	cytosol	78.95	78.95
CDX90420	Canola	cytosol	78.95	78.95
CDX76545	Canola	cytosol	78.95	78.95
Bra021023.1-P	Field mustard	cytosol	78.95	78.95
CDY01520	Canola	extracellular	78.95	78.95
CDY08886	Canola	cytosol	78.95	78.95
CDY35163	Canola	cytosol	78.95	78.95
Bra013284.1-P	Field mustard	cytosol	78.95	78.95
CDY61673	Canola	cytosol	78.95	78.95
Bra012616.1-P	Field mustard	cytosol	78.95	78.95
HORVU5Hr1G075420.2	Barley	plastid	90.23	78.43
CDY33476	Canola	cytosol	78.2	78.2
CDY03219	Canola	cytosol	78.2	78.2
CDX77662	Canola	cytosol	78.2	78.2
Bra017545.1-P	Field mustard	cytosol	77.44	77.44
AT5G46430.1	Thale cress	cytosol	76.69	76.69
VIT_00s0260g00080.t01	Wine grape	cytosol	75.94	74.81
PGSC0003DMT400054361	Potato	cytosol	42.11	73.68
GSMUA_Achr6P12040_001	Banana	cytosol	87.97	71.78
KRH12807	Soybean	cytosol	56.39	70.09
TraesCS5B01G278500.2	Wheat	cytosol, mitochondrion	90.98	69.54
TraesCS5D01G286200.2	Wheat	cytosol, mitochondrion	90.98	69.54
CDY35926	Canola	cytosol	35.34	38.21
CDY28057	Canola	cytosol	38.35	37.23
PGSC0003DMT400035383	Potato	cytosol, mitochondrion	79.7	28.04

Protein Annotations

MapMan:17.1.2.1.33	EntrezGene:8058961	UniProt:C5X4M6	EnsemblPlants:EER97002	ProteinID:EER97002	ProteinID:EER97002.1
GO:GO:0003674	GO:GO:0003735	GO:GO:0005198	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005829	GO:GO:0005840	GO:GO:0006412	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	GO:GO:0019538	GO:GO:0022625	PFAM:PD003823	PFAM:PF01655
PANTHER:PTHR23413	InterPro:Ribosomal_L32e	InterPro:Ribosomal_L32e_sf	SMART:SM01393	EnsemblPlantsGene:SORBI_3002G255100	SUPFAM:SSF52042
unigene:Sbi.6185	UniParc:UPI0001A8381E	RefSeq:XP_002460481.1	:	:	:

Description

hypothetical protein

Coordinates

chr2:+:64146296..64148236

Molecular Weight (calculated)

15786.6 Da

IEP (calculated)

11.173

GRAVY (calculated)

-0.760

Length

133 amino acids

Sequence
(BLAST)

001: MAVPLLTQKI VKKRVKQFKR PHLDRYKCLK PSWRRPKGID SRVRRKFKGC TLMPNIGYGS DKKTRHYLPN KFKKFVVHNV SELELLMMHN RTYCAEIAHN
101: VSTRKRKEIV ERAAQLDIVV TNKLARLRSQ EDE

Best Arabidopsis Sequence Match ( AT4G18100.1 )
(BLAST)

001: MAVPLLTKKV VKKRSAKFIR PQSDRRITVK ESWRRPKGID SRVRRKFKGV TLMPNVGYGS DKKTRHYLPN GFKKFVVHNT SELELLMMHN RTYCAEIAHN
101: VSTKKRKAIV ERASQLDVVV TNRLARLRSQ EDE

Arabidopsis Description

RPL32A60S ribosomal protein L32-1 [Source:UniProtKB/Swiss-Prot;Acc:P49211]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.