Factsheet for GSMUA_Achr10P17110_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 4
cytosol 3
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os08t0524600-00	Rice	cytosol, endoplasmic reticulum	30.83	97.62
GSMUA_Achr7P19740_001	Banana	cytosol	94.74	94.74
GSMUA_Achr3P02470_001	Banana	cytosol, mitochondrion, nucleus, plastid	93.98	93.98
VIT_10s0003g02650.t01	Wine grape	cytosol, plastid	91.73	91.73
KRH58920	Soybean	cytosol, plastid	90.98	90.98
KRH42824	Soybean	cytosol, plastid	90.98	90.98
KRH31095	Soybean	nucleus	90.98	90.98
Os09t0502000-01	Rice	nucleus	90.23	90.23
KRH67946	Soybean	endoplasmic reticulum	90.23	90.23
KRH18320	Soybean	endoplasmic reticulum	90.23	90.23
KRH42825	Soybean	nucleus	89.47	89.47
Zm00001d049790_P007	Maize	cytosol	89.47	89.47
Zm00001d021020_P001	Maize	mitochondrion, plastid	89.47	89.47
KRH12802	Soybean	cytosol	89.47	89.47
TraesCS7B01G152300.1	Wheat	cytosol, mitochondrion	89.47	88.81
Os09t0501200-01	Rice	nucleus	88.72	88.72
Solyc08g006900.2.1	Tomato	nucleus	88.72	88.72
EER97002	Sorghum	cytosol	88.72	88.72
EER99136	Sorghum	cytosol	88.72	88.72
EES15331	Sorghum	cytosol	88.72	88.72
TraesCS7B01G152900.1	Wheat	golgi, unclear	88.72	88.72
TraesCS7A01G255800.1	Wheat	cytosol, mitochondrion	87.97	87.97
PGSC0003DMT400022579	Potato	cytosol	87.97	87.97
Zm00001d006064_P002	Maize	cytosol	87.97	87.31
TraesCS5A01G279100.1	Wheat	golgi	86.47	86.47
HORVU7Hr1G052800.8	Barley	cytosol	85.71	85.71
TraesCS5B01G278700.1	Wheat	cytosol	84.21	84.21
TraesCS5A01G279400.1	Wheat	unclear	84.21	84.21
TraesCS5D01G286400.1	Wheat	cytosol	84.21	84.21
CDY03219	Canola	cytosol	82.71	82.71
CDY33476	Canola	cytosol	82.71	82.71
CDX77662	Canola	cytosol	82.71	82.71
Bra017545.1-P	Field mustard	cytosol	81.95	81.95
CDX90420	Canola	cytosol	81.95	81.95
Bra021023.1-P	Field mustard	cytosol	81.95	81.95
CDX76545	Canola	cytosol	81.95	81.95
AT4G18100.1	Thale cress	cytosol	81.95	81.95
CDX78825	Canola	cytosol	81.95	81.95
CDY01520	Canola	extracellular	81.95	81.95
CDY08886	Canola	cytosol	81.95	81.95
Bra013284.1-P	Field mustard	cytosol	81.95	81.95
CDY61673	Canola	cytosol	81.95	81.95
Bra012616.1-P	Field mustard	cytosol	81.95	81.95
CDY35163	Canola	cytosol	81.95	81.95
Solyc02g070310.2.1	Tomato	nucleus, plastid	81.2	81.2
PGSC0003DMT400005838	Potato	cytosol	80.45	80.45
TraesCS7D01G254200.1	Wheat	cytosol, mitochondrion	89.47	80.41
AT5G46430.1	Thale cress	cytosol	79.7	79.7
PGSC0003DMT400054361	Potato	cytosol	45.11	78.95
GSMUA_Achr6P12040_001	Banana	cytosol	94.74	77.3
HORVU5Hr1G075500.3	Barley	cytosol	84.21	76.19
Zm00001d021018_P002	Maize	cytosol	87.97	75.48
HORVU5Hr1G075420.2	Barley	plastid	85.71	74.51
VIT_00s0260g00080.t01	Wine grape	cytosol	75.19	74.07
TraesCS7A01G256300.1	Wheat	cytosol	90.23	73.62
TraesCS7D01G257100.1	Wheat	cytosol, mitochondrion	89.47	73.01
Os09t0501700-00	Rice	nucleus	89.47	70.0
KRH12807	Soybean	cytosol	54.89	68.22
TraesCS5D01G286200.2	Wheat	cytosol, mitochondrion	86.47	66.09
TraesCS5B01G278500.2	Wheat	cytosol, mitochondrion	86.47	66.09
Zm00001d031560_P001	Maize	plastid	89.47	58.05
CDY35926	Canola	cytosol	34.59	37.4
CDY28057	Canola	cytosol	36.09	35.04
PGSC0003DMT400035383	Potato	cytosol, mitochondrion	79.7	28.04

Protein Annotations

MapMan:17.1.2.1.33	GO:GO:0003674	GO:GO:0003735	GO:GO:0005198	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005840	GO:GO:0006412	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	GO:GO:0019538	EnsemblPlantsGene:GSMUA_Achr10G17110_001	EnsemblPlants:GSMUA_Achr10P17110_001	EnsemblPlants:GSMUA_Achr10T17110_001
UniProt:M0RIY6	PFAM:PD003823	PFAM:PF01655	PANTHER:PTHR23413	InterPro:Ribosomal_L32e	InterPro:Ribosomal_L32e_sf
SMART:SM01393	SUPFAM:SSF52042	UniParc:UPI000294A7A8	SEG:seg	:	:

Description

60S ribosomal protein L32-1 [Source:GMGC_GENE;Acc:GSMUA_Achr10G17110_001]

Coordinates

chr10:-:24443035..24446022

Molecular Weight (calculated)

15575.5 Da

IEP (calculated)

11.229

GRAVY (calculated)

-0.650

Length

133 amino acids

Sequence
(BLAST)

001: MAVPLLTKKI VKKRVKKFKR PQSDRKICVK PNWRRPKGID SRVRRKFKGC TLMPNIGYGS DKKTRHYLPN GFKKLVVYNV AELELLMMHN RTYCAEIAHN
101: VSTKKRKLIV ERAAQLDIVV TNKLARLRSQ EDE

Best Arabidopsis Sequence Match ( AT4G18100.1 )
(BLAST)

001: MAVPLLTKKV VKKRSAKFIR PQSDRRITVK ESWRRPKGID SRVRRKFKGV TLMPNVGYGS DKKTRHYLPN GFKKFVVHNT SELELLMMHN RTYCAEIAHN
101: VSTKKRKAIV ERASQLDVVV TNRLARLRSQ EDE

Arabidopsis Description

RPL32A60S ribosomal protein L32-1 [Source:UniProtKB/Swiss-Prot;Acc:P49211]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.