Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 3
- cytosol 3
- nucleus 1
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5A01G279400.1 | Wheat | unclear | 100.0 | 100.0 |
| TraesCS5D01G286400.1 | Wheat | cytosol | 100.0 | 100.0 |
| TraesCS7B01G152900.1 | Wheat | golgi, unclear | 93.98 | 93.98 |
| TraesCS7B01G152300.1 | Wheat | cytosol, mitochondrion | 92.48 | 91.79 |
| Os09t0501200-01 | Rice | nucleus | 90.98 | 90.98 |
| HORVU5Hr1G075500.3 | Barley | cytosol | 100.0 | 90.48 |
| EER97002 | Sorghum | cytosol | 89.47 | 89.47 |
| Zm00001d006064_P002 | Maize | cytosol | 88.72 | 88.06 |
| VIT_10s0003g02650.t01 | Wine grape | cytosol, plastid | 84.96 | 84.96 |
| KRH18320 | Soybean | endoplasmic reticulum | 84.21 | 84.21 |
| GSMUA_Achr7P19740_001 | Banana | cytosol | 84.21 | 84.21 |
| GSMUA_Achr3P02470_001 | Banana | cytosol, mitochondrion, nucleus, plastid | 84.21 | 84.21 |
| GSMUA_Achr10P... | Banana | cytosol | 84.21 | 84.21 |
| KRH12802 | Soybean | cytosol | 84.21 | 84.21 |
| KRH31095 | Soybean | nucleus | 84.21 | 84.21 |
| KRH42824 | Soybean | cytosol, plastid | 84.21 | 84.21 |
| KRH58920 | Soybean | cytosol, plastid | 84.21 | 84.21 |
| KRH67946 | Soybean | endoplasmic reticulum | 83.46 | 83.46 |
| Solyc08g006900.2.1 | Tomato | nucleus | 83.46 | 83.46 |
| PGSC0003DMT400022579 | Potato | cytosol | 83.46 | 83.46 |
| KRH42825 | Soybean | nucleus | 82.71 | 82.71 |
| Solyc02g070310.2.1 | Tomato | nucleus, plastid | 78.95 | 78.95 |
| AT4G18100.1 | Thale cress | cytosol | 78.2 | 78.2 |
| PGSC0003DMT400005838 | Potato | cytosol | 78.2 | 78.2 |
| CDY61673 | Canola | cytosol | 76.69 | 76.69 |
| CDY35163 | Canola | cytosol | 76.69 | 76.69 |
| CDY08886 | Canola | cytosol | 76.69 | 76.69 |
| CDY01520 | Canola | extracellular | 76.69 | 76.69 |
| CDX90420 | Canola | cytosol | 76.69 | 76.69 |
| CDX78825 | Canola | cytosol | 76.69 | 76.69 |
| CDX76545 | Canola | cytosol | 76.69 | 76.69 |
| Bra021023.1-P | Field mustard | cytosol | 76.69 | 76.69 |
| Bra013284.1-P | Field mustard | cytosol | 76.69 | 76.69 |
| Bra012616.1-P | Field mustard | cytosol | 76.69 | 76.69 |
| Zm00001d021018_P002 | Maize | cytosol | 88.72 | 76.13 |
| CDY33476 | Canola | cytosol | 75.94 | 75.94 |
| CDY03219 | Canola | cytosol | 75.94 | 75.94 |
| CDX77662 | Canola | cytosol | 75.94 | 75.94 |
| AT5G46430.1 | Thale cress | cytosol | 75.94 | 75.94 |
| Bra017545.1-P | Field mustard | cytosol | 75.19 | 75.19 |
| TraesCS5B01G278500.2 | Wheat | cytosol, mitochondrion | 97.74 | 74.71 |
| VIT_00s0260g00080.t01 | Wine grape | cytosol | 74.44 | 73.33 |
| PGSC0003DMT400054361 | Potato | cytosol | 41.35 | 72.37 |
| KRH12807 | Soybean | cytosol | 55.64 | 69.16 |
| GSMUA_Achr6P12040_001 | Banana | cytosol | 84.21 | 68.71 |
| CDY35926 | Canola | cytosol | 35.34 | 38.21 |
| CDY28057 | Canola | cytosol | 38.35 | 37.23 |
| PGSC0003DMT400035383 | Potato | cytosol, mitochondrion | 77.44 | 27.25 |
Protein Annotations
| MapMan:17.1.2.1.33 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003735 | GO:GO:0005198 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005840 | GO:GO:0006412 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0019538 | PFAM:PD003823 | PFAM:PF01655 |
| PANTHER:PTHR23413 | InterPro:Ribosomal_L32e | InterPro:Ribosomal_L32e_sf | SMART:SM01393 | SUPFAM:SSF52042 | EnsemblPlantsGene:TraesCS5B01G278700 |
| EnsemblPlants:TraesCS5B01G278700.1 | TIGR:cd00513 | : | : | : | : |
Description
No Description!
Coordinates
chr5B:-:464364270..464365800
Molecular Weight (calculated)
15555.2 Da
IEP (calculated)
11.353
GRAVY (calculated)
-0.650
Length
133 amino acids
Sequence
(BLAST)
(BLAST)
001: MAVPILKTAI VKKRVKHFKR AHSDRYIGLK QSWRRPKGID SRVRRKFKGC TLMPNIGYGS NKKTRHYLPN KFKKFVVHNV SELELLMMHN RTYCAEIAHN
101: VSTQKRKAIV ERAAQLDVVV TNKLARLRSQ EDE
101: VSTQKRKAIV ERAAQLDVVV TNKLARLRSQ EDE
001: MAVPLLTKKV VKKRSAKFIR PQSDRRITVK ESWRRPKGID SRVRRKFKGV TLMPNVGYGS DKKTRHYLPN GFKKFVVHNT SELELLMMHN RTYCAEIAHN
101: VSTKKRKAIV ERASQLDVVV TNRLARLRSQ EDE
101: VSTKKRKAIV ERASQLDVVV TNRLARLRSQ EDE
Arabidopsis Description
RPL32A60S ribosomal protein L32-1 [Source:UniProtKB/Swiss-Prot;Acc:P49211]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.