Factsheet for HORVU5Hr1G075420.2

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 3
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, mitochondrion, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	mitochondrion
TargetP:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5A01G279100.1	Wheat	golgi	86.27	99.25
Os09t0501200-01	Rice	nucleus	80.39	92.48
EER97002	Sorghum	cytosol	78.43	90.23
HORVU5Hr1G075500.3	Barley	cytosol	86.27	89.8
Zm00001d006064_P002	Maize	cytosol	77.78	88.81
HORVU7Hr1G052800.8	Barley	cytosol	77.12	88.72
VIT_10s0003g02650.t01	Wine grape	cytosol, plastid	75.16	86.47
KRH42824	Soybean	cytosol, plastid	74.51	85.71
KRH31095	Soybean	nucleus	74.51	85.71
KRH18320	Soybean	endoplasmic reticulum	74.51	85.71
KRH58920	Soybean	cytosol, plastid	74.51	85.71
KRH12802	Soybean	cytosol	74.51	85.71
GSMUA_Achr7P19740_001	Banana	cytosol	74.51	85.71
GSMUA_Achr3P02470_001	Banana	cytosol, mitochondrion, nucleus, plastid	74.51	85.71
GSMUA_Achr10P...	Banana	cytosol	74.51	85.71
KRH67946	Soybean	endoplasmic reticulum	73.86	84.96
PGSC0003DMT400022579	Potato	cytosol	73.86	84.96
Solyc08g006900.2.1	Tomato	nucleus	73.86	84.96
KRH42825	Soybean	nucleus	73.2	84.21
Solyc02g070310.2.1	Tomato	nucleus, plastid	69.93	80.45
PGSC0003DMT400005838	Potato	cytosol	69.28	79.7
AT4G18100.1	Thale cress	cytosol	69.28	79.7
CDY61673	Canola	cytosol	67.97	78.2
CDY35163	Canola	cytosol	67.97	78.2
CDY08886	Canola	cytosol	67.97	78.2
CDY01520	Canola	extracellular	67.97	78.2
CDX90420	Canola	cytosol	67.97	78.2
CDX78825	Canola	cytosol	67.97	78.2
CDX76545	Canola	cytosol	67.97	78.2
Bra021023.1-P	Field mustard	cytosol	67.97	78.2
Bra013284.1-P	Field mustard	cytosol	67.97	78.2
Bra012616.1-P	Field mustard	cytosol	67.97	78.2
AT5G46430.1	Thale cress	cytosol	67.32	77.44
CDY33476	Canola	cytosol	67.32	77.44
CDY03219	Canola	cytosol	67.32	77.44
CDX77662	Canola	cytosol	67.32	77.44
Zm00001d021018_P002	Maize	cytosol	77.78	76.77
Bra017545.1-P	Field mustard	cytosol	66.67	76.69
TraesCS5B01G278500.2	Wheat	cytosol, mitochondrion	86.27	75.86
TraesCS5D01G286200.2	Wheat	cytosol, mitochondrion	86.27	75.86
PGSC0003DMT400054361	Potato	cytosol	37.25	75.0
VIT_00s0260g00080.t01	Wine grape	cytosol	65.36	74.07
GSMUA_Achr6P12040_001	Banana	cytosol	75.16	70.55
KRH12807	Soybean	cytosol	49.02	70.09
CDY35926	Canola	cytosol	30.72	38.21
CDY28057	Canola	cytosol	33.33	37.23
PGSC0003DMT400035383	Potato	cytosol, mitochondrion	68.63	27.78

Protein Annotations

MapMan:17.1.2.1.33	UniProt:A0A287RTV4	GO:GO:0003674	GO:GO:0003735	GO:GO:0005198	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005840	GO:GO:0006412	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0019538	EnsemblPlantsGene:HORVU5Hr1G075420	EnsemblPlants:HORVU5Hr1G075420.2
PFAM:PD003823	PFAM:PF01655	PANTHER:PTHR23413	InterPro:Ribosomal_L32e	InterPro:Ribosomal_L32e_sf	SMART:SM01393
SUPFAM:SSF52042	UniParc:UPI000B470C57	SEG:seg	:	:	:

Description

No Description!

Coordinates

chrchr5H:+:547114256..547116226

Molecular Weight (calculated)

17644.8 Da

IEP (calculated)

11.675

GRAVY (calculated)

-0.712

Length

153 amino acids

Sequence
(BLAST)

001: PSAAAAARPP ARPLRRSSTK MAVPMLKKAI VKKRVKHFKR AHSDRYIGLK QSWRRPKGID SRVRRKFKGC TLMPNIGYGS DKKTRHYLPN KFKKFVVHNV
101: SELELLMMHN RTYCAEIAHN VSTQKRKAIV ERAAQLDVVV TNKLARLRSQ EDE

Best Arabidopsis Sequence Match ( AT4G18100.1 )
(BLAST)

001: MAVPLLTKKV VKKRSAKFIR PQSDRRITVK ESWRRPKGID SRVRRKFKGV TLMPNVGYGS DKKTRHYLPN GFKKFVVHNT SELELLMMHN RTYCAEIAHN
101: VSTKKRKAIV ERASQLDVVV TNRLARLRSQ EDE

Arabidopsis Description

RPL32A60S ribosomal protein L32-1 [Source:UniProtKB/Swiss-Prot;Acc:P49211]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.