Factsheet for Os09t0501700-00

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 6
cytosol 4

Predictors

GFP

MS/MS

Papers

nucleus: 23777608

msms PMID: 23777608 doi

H Mujahid, F Tan, J Zhang, BR Nallamilli, K Pendarvis, Z Peng

Department of Biochemistry, Molecular Biology, Entomology and Plant Pathology, Mississippi State University, Starkville, MS 39762, USA.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os09t0502000-01	Rice	nucleus	77.65	99.25
Os09t0501200-01	Rice	nucleus	76.47	97.74
Os08t0524600-00	Rice	cytosol, endoplasmic reticulum	24.12	97.62
Zm00001d021020_P001	Maize	mitochondrion, plastid	74.71	95.49
EER99136	Sorghum	cytosol	74.12	94.74
GSMUA_Achr7P19740_001	Banana	cytosol	70.0	89.47
GSMUA_Achr10P...	Banana	cytosol	70.0	89.47
Solyc08g006900.2.1	Tomato	nucleus	69.41	88.72
GSMUA_Achr3P02470_001	Banana	cytosol, mitochondrion, nucleus, plastid	69.41	88.72
VIT_10s0003g02650.t01	Wine grape	cytosol, plastid	69.41	88.72
PGSC0003DMT400022579	Potato	cytosol	68.82	87.97
KRH58920	Soybean	cytosol, plastid	68.24	87.22
KRH42824	Soybean	cytosol, plastid	68.24	87.22
KRH31095	Soybean	nucleus	68.24	87.22
KRH67946	Soybean	endoplasmic reticulum	67.65	86.47
KRH18320	Soybean	endoplasmic reticulum	67.65	86.47
KRH42825	Soybean	nucleus	67.06	85.71
KRH12802	Soybean	cytosol	67.06	85.71
Solyc02g070310.2.1	Tomato	nucleus, plastid	64.12	81.95
CDY08886	Canola	cytosol	63.53	81.2
PGSC0003DMT400005838	Potato	cytosol	63.53	81.2
AT4G18100.1	Thale cress	cytosol	63.53	81.2
Bra012616.1-P	Field mustard	cytosol	63.53	81.2
Bra013284.1-P	Field mustard	cytosol	63.53	81.2
Bra021023.1-P	Field mustard	cytosol	63.53	81.2
CDX76545	Canola	cytosol	63.53	81.2
CDX78825	Canola	cytosol	63.53	81.2
CDY61673	Canola	cytosol	63.53	81.2
CDX90420	Canola	cytosol	63.53	81.2
CDY35163	Canola	cytosol	63.53	81.2
CDY01520	Canola	extracellular	63.53	81.2
CDX77662	Canola	cytosol	62.94	80.45
CDY33476	Canola	cytosol	62.94	80.45
CDY03219	Canola	cytosol	62.94	80.45
Bra017545.1-P	Field mustard	cytosol	62.35	79.7
AT5G46430.1	Thale cress	cytosol	61.76	78.95
PGSC0003DMT400054361	Potato	cytosol	34.71	77.63
GSMUA_Achr6P12040_001	Banana	cytosol	71.18	74.23
VIT_00s0260g00080.t01	Wine grape	cytosol	58.24	73.33
KRH12807	Soybean	cytosol	42.94	68.22
CDY35926	Canola	cytosol	27.65	38.21
CDY28057	Canola	cytosol	30.0	37.23
PGSC0003DMT400035383	Potato	cytosol, mitochondrion	62.94	28.31

Protein Annotations

MapMan:17.1.2.1.33	EntrezGene:4347487	UniProt:B9G4E8	ProteinID:BAT08818.1	ProteinID:EEE69996.1	GO:GO:0003674
GO:GO:0003735	GO:GO:0005198	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005829	GO:GO:0005840	GO:GO:0006412	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0019538	GO:GO:0022625	EnsemblPlantsGene:Os09g0501700	EnsemblPlants:Os09t0501700-00	PFAM:PD003823
PFAM:PF01655	PANTHER:PTHR23413	InterPro:Ribosomal_L32e	InterPro:Ribosomal_L32e_sf	SMART:SM01393	SUPFAM:SSF52042
UniParc:UPI0000DD97DA	RefSeq:XP_015610703.1	SEG:seg	:	:	:

Description

rpL32_9.2Ribosomal protein L32e family protein. (Os09t0501700-00)

Coordinates

chr9:-:19413412..19414815

Molecular Weight (calculated)

19762.5 Da

IEP (calculated)

11.235

GRAVY (calculated)

-0.741

Length

170 amino acids

Sequence
(BLAST)

001: MDSTILGFLD IRKPSLLPNS STPPPPPPPR RCSDRSKMAV PLLTKKIVKK RVKQFKRPHS DRYIGLKTSW RRPKGIDSRV RRKFKGCTLM PNIGYGSDKK
101: TRHYLPNKFK KFVVHNVSEL ELLMMHNRMY CAEIAHNVST KKRKEIVERA AQLDIVVTNK LARLRSQEDE

Best Arabidopsis Sequence Match ( AT4G18100.1 )
(BLAST)

001: MAVPLLTKKV VKKRSAKFIR PQSDRRITVK ESWRRPKGID SRVRRKFKGV TLMPNVGYGS DKKTRHYLPN GFKKFVVHNT SELELLMMHN RTYCAEIAHN
101: VSTKKRKAIV ERASQLDVVV TNRLARLRSQ EDE

Arabidopsis Description

RPL32A60S ribosomal protein L32-1 [Source:UniProtKB/Swiss-Prot;Acc:P49211]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.