Factsheet for TraesCS7D01G254200.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, cytosol

Predictor Summary:

plastid 3
cytosol 2
mitochondrion 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7B01G152300.1	Wheat	cytosol, mitochondrion	89.86	99.25
TraesCS7A01G255800.1	Wheat	cytosol, mitochondrion	88.51	98.5
Os09t0502000-01	Rice	nucleus	86.49	96.24
HORVU7Hr1G052800.8	Barley	cytosol	85.81	95.49
TraesCS5D01G286400.1	Wheat	cytosol	83.11	92.48
GSMUA_Achr7P19740_001	Banana	cytosol	80.41	89.47
GSMUA_Achr10P...	Banana	cytosol	80.41	89.47
GSMUA_Achr3P02470_001	Banana	cytosol, mitochondrion, nucleus, plastid	79.73	88.72
VIT_10s0003g02650.t01	Wine grape	cytosol, plastid	79.05	87.97
KRH58920	Soybean	cytosol, plastid	79.05	87.97
KRH42824	Soybean	cytosol, plastid	79.05	87.97
KRH31095	Soybean	nucleus	79.05	87.97
Solyc08g006900.2.1	Tomato	nucleus	78.38	87.22
KRH67946	Soybean	endoplasmic reticulum	78.38	87.22
KRH18320	Soybean	endoplasmic reticulum	78.38	87.22
PGSC0003DMT400022579	Potato	cytosol	77.7	86.47
KRH42825	Soybean	nucleus	77.7	86.47
KRH12802	Soybean	cytosol	77.7	86.47
TraesCS7D01G257100.1	Wheat	cytosol, mitochondrion	89.19	80.98
AT4G18100.1	Thale cress	cytosol	72.3	80.45
CDY08886	Canola	cytosol	72.3	80.45
Bra012616.1-P	Field mustard	cytosol	72.3	80.45
Bra013284.1-P	Field mustard	cytosol	72.3	80.45
Solyc02g070310.2.1	Tomato	nucleus, plastid	72.3	80.45
Bra021023.1-P	Field mustard	cytosol	72.3	80.45
CDX76545	Canola	cytosol	72.3	80.45
CDX78825	Canola	cytosol	72.3	80.45
CDX90420	Canola	cytosol	72.3	80.45
CDY01520	Canola	extracellular	72.3	80.45
CDY61673	Canola	cytosol	72.3	80.45
CDY35163	Canola	cytosol	72.3	80.45
CDX77662	Canola	cytosol	71.62	79.7
PGSC0003DMT400005838	Potato	cytosol	71.62	79.7
CDY03219	Canola	cytosol	71.62	79.7
CDY33476	Canola	cytosol	71.62	79.7
Bra017545.1-P	Field mustard	cytosol	70.95	78.95
AT5G46430.1	Thale cress	cytosol	70.27	78.2
VIT_00s0260g00080.t01	Wine grape	cytosol	68.92	75.56
PGSC0003DMT400054361	Potato	cytosol	38.51	75.0
GSMUA_Achr6P12040_001	Banana	cytosol	80.41	73.01
TraesCS5D01G286200.2	Wheat	cytosol, mitochondrion	84.46	71.84
KRH12807	Soybean	cytosol	51.35	71.03
CDY35926	Canola	cytosol	31.76	38.21
CDY28057	Canola	cytosol	34.46	37.23
PGSC0003DMT400035383	Potato	cytosol, mitochondrion	70.95	27.78

Protein Annotations

MapMan:17.1.2.1.33	GO:GO:0003674	GO:GO:0003735	GO:GO:0005198	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005840	GO:GO:0006412	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	GO:GO:0019538	PFAM:PD003823	PFAM:PF01655	InterPro:Ribosomal_L32e
InterPro:Ribosomal_L32e_sf	SMART:SM01393	SUPFAM:SSF52042	EnsemblPlantsGene:TraesCS7D01G254200	EnsemblPlants:TraesCS7D01G254200.1	TIGR:cd00513

Description

No Description!

Coordinates

chr7D:+:230992192..230995959

Molecular Weight (calculated)

17330.5 Da

IEP (calculated)

11.263

GRAVY (calculated)

-0.595

Length

148 amino acids

Sequence
(BLAST)

001: MAVPLLTRKI VKKRVKHFKR AHSDRYIGLK LRCIPNLSLT LNSTMTSWRR PKGIDSRVRR KFKGCTLMPN IGYGSDKKTR HYLPNKFKKF VVHNVSELEL
101: LMMHNRTYCA EIAHNVSTKK RKDIVERAAQ LDIVVTNKLA RLRSQEDE

Best Arabidopsis Sequence Match ( AT4G18100.1 )
(BLAST)

001: MAVPLLTKKV VKKRSAKFIR PQSDRRITVK ESWRRPKGID SRVRRKFKGV TLMPNVGYGS DKKTRHYLPN GFKKFVVHNT SELELLMMHN RTYCAEIAHN
101: VSTKKRKAIV ERASQLDVVV TNRLARLRSQ EDE

Arabidopsis Description

RPL32A60S ribosomal protein L32-1 [Source:UniProtKB/Swiss-Prot;Acc:P49211]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.